Anarhichas minor (spotted wolffish): 142958976
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Entry
142958976 CDS
T11660
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir04142
Lysosome biogenesis
amir04144
Endocytosis
amir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142958976
04142 Lysosome biogenesis
142958976
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142958976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amir04131
]
142958976
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amir04147
]
142958976
Membrane trafficking [BR:
amir04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
142958976
Exosome [BR:
amir04147
]
Exosomal proteins
Proteins found in most exosomes
142958976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
142958976
NCBI-ProteinID:
XP_075956178
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQSGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHDGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAVQYYLEFKPLLLNDLLIVLSPRLDHSRAVNYFS
KVKQLPLIKPYLRSVQNHNNKSVNEALNNLFIVEEDYAALRASIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQETESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPAAPGYGQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctaccgatccgcttccaggagcacctgcagctccagaacctggggatc
aacccggccaacatcggattcagcactctaaccatggagtccgacaagttcatctgtata
agagagaaagtgggggagcaggcccaggttgtcatcatcgacatggccgaccccaacaat
cccatccgccggcctatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagcggcaaagaccctgcagatcttcaacatcgagatgaagagcaagatgaag
gctcacacgatgacggacgacgtgaccttctggaagtggatctccctcaacaccgtggcc
ttggtcacagacaacgccgtctaccattggagcatggagggggactctcagccaatcaaa
gtctttgaccgtcactccagcctggcaggctgccagatcataaactaccgcaccgacgcc
aaacagaagtggctgctgctcatcggcatttcagcacagcaaaaccgtgttgtcggagcc
atgcagctgtactccgtggacaggaaggtgtctcagcccattgagggacacgccgctggc
tttgcacagttcaagatggagggcaacaccgaagagtccaccctgttctgctttgctgtg
cgaggacaggcaggaggaaagctgcatattattgaagtggggactccgccgactgggaac
cagccatttccaaagaaagctgtggacgttttctttcctccagaagcccaaaatgacttc
cctgttgctatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctgtacgacctggagactgggacttgcatctacatgaacaggatcagcggg
gagaccatttttgtcactgccccccatgagcctactgcgggtatcatcggagtcaacagg
aaaggacaggtgttgtccgtgtgcgtggaggaggaaaacatcattccctacatcaccaat
gtgctgcagaacccagacctggccctccgcatggctgtccgcaacaacctcgccggtgct
gaggagctgtttgcccgcaagttcaacaccctctttgcagcgggaaattattccgaggct
gccaaggtggcggccaatgcacccaagggtatcctgcggaccccagacaccatccgtcgg
ttccagagtgttccagcccaatcaggccagacgtctcccttgctccaatactttggcatc
ttgctggaccaaggccaacttaataagtttgagtctctggagctgtgcaggcctgtcctc
caacagggccgcaagcagctcctagagaaatggttgaaagaggacaagctggagtgctct
gaggagcttggagacttggtgaagtctgtagatcctactcttgccctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgctttgcagagactggacagttccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatctttctgctgaggaat
gtaatgcggatcagtccagaacagggccttcagttctcccagatgctggttcaggacgaa
gagccactcgcggacattacacagatcgttgatgtgttcatggagtacaacctgatccag
cagtgcacctccttcctcttagatgccctgaagaataacagacccatggagggacctctg
cagacacgcctgctggaaatgaatttggtgcacgcaccacaggttgcagacgccatcctg
ggcaatcagatgttcactcactatgatcgcgctcacgtggcacagctgtgtgagaaggcc
ggtctcctgcagagggcgctggagcattatactgacctgtatgatattaagcgcgccgtg
gtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctccttgtcagtg
gaggactctctggagtgtctgagggccatgctctctgcaaacatccgccagaacctgcag
atctgtgtccaggtcgcctccaagtaccatgaacagctctctactcagtccctcactgaa
ctttttgagtcattcaagagctttgagggtttgttctatttcttgggttctattgtgaac
ttcagccaggatccagaggtccacttcaaatatatccaggccgcctgcaagacgggccag
atcaaagaggtggagagaatctgtagagagagtaactgctacgacccggaacgtgtgaag
aacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgcgaccgc
tttgattttgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaagtacatt
gagatctacgtgcagaaggtgaacccaagccgtctgccggtggtcattggagggttactg
gatgtggattgtgctgaggatgtgatcaagaacctgattctggtggttagagggcagttc
tccacagatgaactggtggctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttagaggctcgtattcatgacggatgtgaggagcctgctacccacaatgccctggcc
aagatctacatcgacagcaacaacaacccagagcgattcctgagggagaaccccttctac
gacagccgtgtggtgggcaagtactgtgagaaaagagacccccacctggcctgcgtggcc
tatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcgctgttc
aagagtctgtcccgctaccttgtacgtcgcaagaaccctgagctgtgggcgagcgtgctg
ctggagaccaacaactacagaagaccactcatcgaccaggtcgtccagacggccttgtct
gagactcaggatccagaggaggtgtctgtcacagtcaaggccttcatgaccgctgacctg
cccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagcgag
cacagaaacctccagaatctgctcatcctgacggccattaaagctgatcggacacgcgtt
atggagtacatcaaccgtctggacaactacgatgccccagacattgcaaacatcgccatc
agcaatgagttgtttgaggaggcctttgctatttttaaaaaatttgatgtcaacacctct
gctgtgcaggttctgattgagcacatcggtaacctggacagagcttatgagtttgccgag
cgctgcaatgagccaccagtgtggagtcagctggctaaggcccagctccagaagggcctg
gtcaaagaagccatcgactcttacatcaaggctgatgacccctctgcttacatggaggtg
ggacaagctgcagcccaaagcggaaattgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggcccgcgagtcatatgttgaaacggagctgatctttgctctggccaagacc
aaccgcctggctgagctggaagagttcatcaatggacccaataatgctcacattcagcaa
gtgggtgatcgatgctatgatgacaagatgtacgacgcagccaaactgctttacaacaac
gtgtccaactttggccgtctggcctccactctggtgcacctgggagagtatcaagcagct
gtggacggagctcgcaaggccaacagcactcgcacctggaaggaggtgtgctttgcgtgt
gtagatgggaaagagttccgtcttgcccaaatgtgtgggctgcatattgtcgtccacgcc
gatgaactggaggaactcatcaactactaccaggaccgcggctacttcgaggagctgatc
accatgctggaggccgccctgggtctggagcgcgctcacatgggcatgttcactgagctg
gccatcctctactctaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tcccgcgtcaacattccaaaggttctcagggcagcagagcaggcccacctctggggggag
ctggtgttcctctacgacaagtacgaggagtacgacaacgccatcatcaccatgatgaac
cacccatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaat
gtggagttgtactacaaggccgtccagtactatctggagttcaaaccattgttactgaac
gacctgctcatcgtcctttctccaagacttgaccactcacgcgctgtcaactacttcagc
aaggtgaaacagctgcctctgattaagccttacctaaggtctgtccagaatcacaacaac
aagtcagtcaatgaggcactgaacaacctcttcatcgttgaggaagactatgcggcattg
cgtgcttccatcgatgcctatgacaacttcgacaacatctcactggcccagggcctggag
aagcatgagctgattgagttcaggaggattgcagcctacctgttcaagggcaacaaccgc
tggaaacagagtgtcgagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatccgagtccaaagacatcgagctggcagaggagctcctggcttggttcctgaacgag
gacaagaaggagtgtttcgcggcctgcctgttcacctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccgtacttcatc
caggtcatgagggagtatctctccaaggttgatgcgataaaggaaaaggtcgacaaactc
gaggcctccgagtccctgaggaaacaggaggagcaggagactgagtctcaaccgattgtt
tatggcacaccccagcttatgctcacagcggggcccaacgtggccgtgcctcctcagcag
ccctacggctacggctacccagcagcaccgggctacggccagcccccacagcccagcttc
ggttacggcatgtga
DBGET
integrated database retrieval system
