Anarhichas minor (spotted wolffish): 142960168
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Entry
142960168 CDS
T11660
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir03013
Nucleocytoplasmic transport
amir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142960168 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
142960168 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amir03019
]
142960168 (thoc2)
03041 Spliceosome [BR:
amir03041
]
142960168 (thoc2)
Messenger RNA biogenesis [BR:
amir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
142960168 (thoc2)
Spliceosome [BR:
amir03041
]
Complex C
Other components
EJC/TREX
142960168 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142960168 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
142960168
NCBI-ProteinID:
XP_075957949
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTKKTDHGSEIRDIQAALYELCWQVVQGNLKL
DLVVSVLGDMMELRDDMPSILADVFSTLDLETAALEEKVKRDHYTQLVGACLFFVPDAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLALIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIVEEHKRDISE
AKQIARKLVMVVVPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVLHPLRNKRAPRPAESFD
DLRRDTFSMICYLGPHLSHDAILFAKIVRLGKAFMKEYQNDGRSDVKEKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYRHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLESGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPAISTSKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADRE
KAKAEEKSSKDDKAKAGNGEPVEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRLESAE
SERDHKRRKIDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVTRSKSRERETEKKESDN
TQGRSKEKKEEKDRKERKRDHALNELETSQESKRRKDENGMNSSKNSKSDSPSCDSPLSA
EKEKIKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagttcgtacaactctgcaaagaactcacaaagaaaacagatcatggaagtgagattaga
gatatacaggcagccttatatgagctctgctggcaggttgtgcaggggaacctgaagttg
gatctggtcgtcagcgtccttggggacatgatggagctccgagacgacatgccatcaatt
ttagcagatgtgttcagtacactagatttagagactgctgcactggaagaaaaagtcaaa
cgtgaccattacacacaactggtgggagcttgtttgttctttgtcccggacgccatcctg
aaagagaggctggatccagaaacccttgaatctcttggacttataaaacaagctcatcag
ttcaatcagaagattgtgaagatcaagactaaactattttacaagcaacagaagttcaac
ttgctaagggaggagaatgagggctatgccaaactcatcaccgagctcggccaagacctc
tcgggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggacatcatcttggaggtgtatgagagtcgatctgac
caagatgagttcttcctggctctcatcaaatcctacatgtgtgagccactcaccctttgc
cacatcctgggatttaagttcaaattctaccaggagcccaatgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccataacctgattgagctggaagatctctac
gtacatcttatgccagtagatgccaccatcgtagaggaacacaaacgagatatctcagag
gccaagcagatcgcccgcaagctggtcatggttgtggtgccctcagagaaaagtgaagac
aaagacaaggagaaggaaaaggaggaggagaagaatgataagccacctgataaccagaag
cttggtctgttggaagcgctgcttagaattggagactggcaccacgcccagagtattatg
gaccagatgccgtccttctacgctacttctcacaaggccattgcgctggctctctgccag
ctcgtgcatctgactgtggagcctctttacagaagggctggcctcccaaaaggggcacga
ggatgcgtcttgcatccactgaggaacaagcgagcccctcgccctgcggagagcttcgac
gacctacgcagggacacgttcagcatgatctgctacctgggccctcatctctcccacgac
gctattctttttgccaagattgtgcgtctgggcaaggccttcatgaaagagtaccaaaat
gatggcagatctgatgtcaaagagaaaatggaaacacttttgagttgcttcctgagcatt
gcagaccaggtgctactcccgtctctctctctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctcttcaaactctttccctaccggcacaggtaccgactatatggacag
tggaagaatgagacgtataccagccatccactgttggtcaaagtcaaagctcaaactgta
gaacgggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaaactgagccatagcaatcccactatcctctttgattatatgctttctcag
atccagtggtacgacaaccttatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggccaatcccgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcaaagcctggcgagtctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcaatatgtcaccaat
cagctaaaagcagggaagagttttgacctgttgatcctaaaagaggtggtgcagaaaatg
gctggcatcgagatcacagatgagatgacctcagagcagttagaggccatgaccggaggg
gagcaactcaaagctgagggtggctactttggtcagatcaggaacacgaagaagtcgtct
cagcgtctgaaggatgcactgctggaccacgagttggccctgcctctgtgcttactcatg
gcccagcaacgaaatggtgttgttttcttagagagtggagagaaacacctcaaacttgtt
ggccacctgtatgaccagtgtcatgacaccttggtgcagtttggtggctttctggcctcc
aaccttagcacagaagactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttctttctgtccaggccaatgtacgcccatcagatt
ttgtccaagtacgatgagttgaagaaagccgagaaaggcaaccggcagcagcagaaggtc
cacaagtacgtggcagcctgtgaacaggtgatgacacccgtgcatgaggcagtagtgtca
ctccatccggccagggtctgggacgacctccgcccccagttctacgctaccttctggtcc
ctcaccatgtacgacctggccgttccacattctgcctacgagcgtgaggtcaacaagctc
aaggtccagatcaaggccatcgaggagaatccagagatacccatgaataagaaaaagaag
gagaaggagcgctgcactgccctgcaagaaaaactgcaggaggaggagaagaaacagctg
gagcacgtccaaagggttctacaccgcctcaaactggagaaagacaactggttgttggcc
aaatctacaaagaacgagaccataacaaagtttctgcagctctgtctgttcccccgctgc
atcttctcgtccatcgacgccgtgtactgcgcacgcttcgtggagctggtccaccagcag
aagacgcccaacttctgcaccctcctgtgctatgaccgggtgttctccgccatcatttac
actgtagccagctgtacggagaacgagtctcaccgctatggacgcttcctctgctgcatg
ctggagacggtgacccgttggcacagcgaccgtgcaatctatgagaaggagtgcgtcaat
taccccggcttcctgaccatcttcagagccacgggcttcgatggcggcaacaaagcagat
cagctggattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcctcagttcactgcctggagacgggagattacacccacatccgcaacattctcatcgtg
ctcaccaagatcctgccctgctaccccaaagtcctgaatctgggccaagcgctggagtgt
cgtgtccacaagatctgcctcgaggagaaggataagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtcccagagaatgagttt
caccacaaggagcagccagcccgcagtgccacccccgccaatcaacagaacggccccggc
agcacaggcaagcctgccatcagcacgagcaagacggaggaggggacgtcggaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggatgacaaagagaagagtgggaaggagaaaaaagagaaaaaggaaaagacgcca
ggcagcactcccgagacgaaggcagagaaccgccgggagaagcagagagacgagagagca
gggaaggaggagcgggtggcacgcgagggtaaggagaagactcccaaggcggaccgggag
aaggccaaggccgaggaaaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccgtggagccgtccagggagcgcgatgccatcaaggagtccaagagcaaggagaaagga
gacaggagtgcagtggctgggtccctaaagtcaccagttcccagattggagtcagccgaa
tctgagagggatcacaaaagacgaaagatcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagttacccggtccaagagcagagagagggagacggagaagaaagagtcagacaac
acacaaggccgatccaaagagaagaaggaagagaaggatcggaaagagaggaagagagac
catgctctcaatgagctcgagacgagccaggagtccaaacgcaggaaggatgagaatgga
atgaattcctccaaaaacagcaagagcgacagtccttcctgtgactccccgctctcagct
gagaaagagaagatcaagagatccaaatcctccagtaaagagaaggcggactctgtgaaa
cctgagcggacttcctctggaggcaaaaaggagtccagacacgacaaagagaaatctgaa
aagaaggagaagagggacagcagcggaggaaaagaagagaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
