Anarhichas minor (spotted wolffish): 142960274
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Entry
142960274 CDS
T11660
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir04137
Mitophagy - animal
amir04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
142960274 (rabgef1)
04137 Mitophagy - animal
142960274 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amir04131
]
142960274 (rabgef1)
Membrane trafficking [BR:
amir04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142960274 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
142960274 (rabgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PIN_8
Motif
Other DBs
NCBI-GeneID:
142960274
NCBI-ProteinID:
XP_075958164
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSQRTERRGGIHVDQSDLLCKKGCGYYGNAGWLGLCSKCWREEYQRVRQKQIQDDWALAE
KLQREEEAAYASSHGAQTQSQSTAPQPHPGHASLGPFSKFEEKKTNEKTRKVTTVKKFFS
PSSRTAPKKETPEGKTPSPSISRRASFDTDQVTKDFADFLKNLQKPGREIQKQCRAFIVN
MSGKKDLGADELSECVQDFYQNLADRLMGHFKGSSESVEQVMDQVEKYIMTRLYKSVFCP
ETTDDEKKDLATQNRIRALHWVTIEMLCVSMDEEIPEVSENVVKAITDVIEMDSKRVPRD
KLGCITSCSKQIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNILYITRFCNPSR
LMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRCNSSEGDWTRAEPP
PAPVNPVLAQLNHNLEVLSGLSSRQETLMEAAQSLQADLLSWPGSVQREVDDVLAKYPLE
VLPRTVSAIDDNDVDNDNLPPPLTPQVFAG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcgacggggggggatccacgtggaccaatcggacctgctgtgc
aaaaagggatgcggttattacggcaacgcggggtggctgggcctgtgctccaagtgctgg
agggaggagtaccagcgtgtgcggcagaaacagatccaggacgactgggccttggcagaa
aagttgcagcgggaggaggaggcagcatacgccagcagtcacggagcgcagacacagtcc
cagtccacagcaccacaaccacacccgggccacgcctccctgggacccttctccaagttt
gaggagaagaagaccaatgagaagacacgtaaagtgaccaccgttaagaagttcttcagc
ccctcgtcacgcaccgctcccaaaaaagaaaccccagagggaaagacacccagtccgtca
atcagccgccgtgccagcttcgatacggaccaggtgaccaaagactttgcagacttcttg
aaaaacctccagaagcccggccgggagatccaaaagcagtgccgggccttcattgtgaac
atgtcgggcaagaaggacctgggtgctgacgagctgtcggagtgcgttcaggatttctac
cagaacttggccgaccgtctgatgggtcactttaaaggctcttcagagtctgtggagcag
gtgatggaccaggtggaaaagtacataatgactcgtctgtacaagagcgtattctgtcca
gaaaccactgatgatgagaagaaggacttggccacacagaacaggataagggcgttacac
tgggtgaccatcgagatgctctgtgtgtctatggatgaagaaatccctgaagtctctgag
aatgtggtcaaagcgataacagacgtcattgagatggactcgaagagggttcctcgggac
aaacttgggtgcatcacgagctgcagcaaacaaatcttcagcgccatcaggatcaccaag
aacgagccggcttcagcagacgactttctccccgcgctcatttacatcgtgctcaaagca
aaccctccgcgacttcagtccaacatcctgtacatcacccgcttctgcaaccccagcagg
ctgatgaccggagaggatggatactacttcaccaacctgtgctgtgcagcggctttcatc
gagaagttggacgctcagtccctcaacctttccccggaggagtttgagcgctacatgtcg
ggccaagcctcgccgcgatgcaacagctcagagggcgactggacccgcgccgaaccgcca
ccggcccccgtcaaccccgtcctggctcagttaaaccacaacctggaggtgctgtcgggc
ctgagcagccggcaggagacgctgatggaggccgctcagagcctgcaggccgacctcctc
tcctggcccgggagcgtgcagcgggaggtggacgacgtcctggcgaaataccctctggag
gttctgcctcgcaccgtgtctgccatcgatgacaacgacgtggacaatgacaacctgcca
ccgccactcacgccccaggtgttcgctgggtag
DBGET
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