Anarhichas minor (spotted wolffish): 142962575
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Entry
142962575 CDS
T11660
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142962575 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amir03019
]
142962575 (cstf2)
Messenger RNA biogenesis [BR:
amir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142962575 (cstf2)
U7-dependent histone pre-mRNA processing factors
142962575 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
142962575
NCBI-ProteinID:
XP_075959258
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MANLAAAAAAAAAAAIAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDNIQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTPVQPLIPSGPVGGAPPLNPPSAPPSVPVPQPQ
PVPGMHVNGAPQMMQPPNMGVVPGPMPVPGPGQGQGPAPGPVGPPGNLQHSPTGSSGQAA
IERPQGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIEPSRGYMAAPPPHQAPPGHMAQMP
SGPPPDMRGPPMDMRGPPMGEPRNMMGDPRGPPMMEQRGPPMETRGRDPRAMDARGPVTG
QRVPMATGMQVPVPHSMGPNAPPPARPGPGNSGAPPSGGGFSPGQSQVSTQDQEKAALIM
QVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGGAP
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagccgctgctgctgcggctgcagctgccgctgctatcgccgcgaataga
gacccagccgttgatcgttcattacgatcagtgtttgtggggaacatcccgtatgaagct
acagaggagcagctgaaagacatcttctctgaagtgggacttgttgttagcttcaggttg
gtgtatgacagggaaacgggaaagccaaagggatatggtttctgtgagtaccaggaccag
gagacggccctcagtgccatgcggaacctgaacgggagagagttcagtggtcgagccctc
cgtgtcgacaacgcagccagtgagaaaaacaaggaagagctcaaaagtttgggaacagga
gcccccatcattgagtctccttatggagacaacatccagccacaggaagccccagagtcc
atcagcagagctgtggccagtcttccccccgagcagatgtttgaacttatgaaacagatg
aagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctgcagaaccctcag
ctggcctatgctctgctgcaggcccaggtggtcatgcggattgttgaccctgagatcgcc
ctgaaaatgctccaccgtcagacacccgtccagcctctgattcccagcgggccggttgga
ggagcaccgccgctcaaccccccttctgctccgcccagcgtgccggtgcctcagccgcag
ccggtgcctggaatgcatgtcaatggagcccctcaaatgatgcagccccccaacatgggg
gttgtccctggaccaatgcctgttccgggaccgggacaaggacaaggaccggcaccagga
ccagtcgggcctccaggaaaccttcagcattctcccacaggatcgtctggtcaagctgct
atcgagcggcctcaaggaccaggtggtatcccccccagaggcctgctgggagacggtccc
aatgatcccagaggaggaactctactgtctgtcacaggagaggtcatcgagcccagccgg
ggttacatggcagctccaccgccccaccaagccccacctggacacatggcccagatgcca
agtggaccccctccggatatgagaggccctccaatggacatgaggggcccacccatgggt
gaaccacgcaacatgatgggtgaccccagagggccccctatgatggagcaacgcggaccc
ccaatggaaaccagaggtcgtgacccgagggcgatggacgctcgtggtccggtgacgggt
cagagggttcccatggccacgggaatgcaagtccccgttcctcatagcatgggtccgaac
gcacctccacctgcaagaccgggtcctggtaactctggcgctcctccgtcaggaggagga
ttcagtccggggcagagccaggtctccacacaggaccaggagaaggctgccctgattatg
caggtcctgcagctgaccccagaacagatcgccatgttgcccccggagcagcggcagagc
atcctcatcctcaaagagcagattcagaagactgcaggaggggcaccttga
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