Anarhichas minor (spotted wolffish): 142964887
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Entry
142964887 CDS
T11660
Symbol
skic2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142964887 (skic2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amir03019
]
142964887 (skic2)
Enzymes [BR:
amir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142964887 (skic2)
Messenger RNA biogenesis [BR:
amir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142964887 (skic2)
mRNA degradation factors
3'-5' decay
Ski complex
142964887 (skic2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
Helicase_C
DEXQc_Suv3
ResIII
MTR4-like_stalk
DUF3516
HTH_23
Motif
Other DBs
NCBI-GeneID:
142964887
NCBI-ProteinID:
XP_075961572
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MDRINVPPAGPTDLPLALLEMGCSGRFELITHPSPDQPLPPQSTLPHGLPPTSLSLEREV
EKQFLRDAAWLPIHDTDFAFQKFLKVTQREVNVDSLINCTPSALHSGISVVRDPTTGMLL
DFTEVLLENTGLSAKNSLSLQRQPGPPSESLRGSNTNYPFRPGGMEELTLDQIKKKSDLE
EDIDFENDLLRVPPGLKAGMDFTDKDAKIAKEEVNLMSLLSTLDDITDLQPVAEEKEEGK
ENEDAPKLPRTNSLEDLGVKDVVSSSTPSERGKDEKSKPKENPEENKKWAVPVNINTPCD
DFYKRIPNPAFKWPFELDVFQKQAVLRLEARESVFVAAHTSAGKTVVAEYAIALSQKHMT
RTIYTSPIKALSNQKFRDFKTTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVI
RDLEWVIFDEVHYINDTERGVVWEEVLIMLPDHVSIILLSATVPNAVEFSEWIGRIKKKH
IYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLLDPTGNFLTKGYYAAVDAKKERTSKHAQ
SFGAKSTSHNTTASQDRSVWLTLLHFLSQRQQTPVVAFTFSRTRCDDNARSLDSMDMTTS
IEKAEIHSFFQKSLSRLRGGDRKLPQILVMRDLLKRGIAVHHSGILPILKEVIEMLFSRG
LVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGT
VIILCKAGVHDMADLHVMMLGRPTTLQSQFRLTYTMILNLLRVEALRVTDMMRRSFSENH
RDTQAQEKRISQLKQMVSSLPPLDTEGQLSDMLPYYHTVTELRTTTEALQRAILESVNGL
KALSVGRVVLVNNKQHLNALGVILQVSSAAVNRTFTALVICEKGNEEEEGKANNNNAFPH
LYNTALFIPEGPCSHTVQKLTLQDISAITVKTLKVIPDRIIDNYSKRQQPRFRLDPPGQA
ISTATQELLRLAEANPSGMATLDPVNDLQLKSVDVVEDSMRLRVLQGSLREFNCIHSPTF
AEQFARVEERMKVQEEMDRLLFLVSDQSLSLLPEYHQRIKVLQALQYVDSGGAVQLKGRV
ACQISCHELLLTELLFENVLSPLAPEESAALLSCLVFTQKTQVEPHITSTLKEGIDRVLS
VAKRIGELQRECGIPQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTVVRCI
QRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggatagaataaatgtgccccccgcgggccccacggacctgccgctggccctgctggag
atgggatgctccggcaggtttgagctcatcacacacccgtcacctgaccagccgttacct
ccacagagcacgctcccgcatgggcttcctcccaccagcctgagcctggagagagaggta
gagaaacagtttttacgggacgctgcctggcttccaatacatgacacagactttgccttc
cagaagtttctcaaggtgactcagagagaagttaatgtcgactctctaatcaactgcacc
ccgtctgcacttcactccggcatctctgttgtcagagatccaaccacagggatgctgctg
gacttcacagaggtgttactggagaacactggcctgtcagcaaagaactctctttcatta
caacgccagcccgggcctccttcagagagccttcgaggaagcaacaccaactaccccttc
cgccccggaggaatggaggagcttactctggaccaaatcaagaagaaatctgatctggag
gaggacatagactttgagaatgatttactcagagtcccgcctggacttaaagctgggatg
gacttcactgacaaagatgccaagatagcaaaggaggaggtcaacctcatgtccctcctg
tccacattggatgacatcactgacttgcaacctgtggcagaggagaaggaggagggcaaa
gaaaatgaggacgctcccaaactacccagaacaaacagccttgaagacctgggagtcaag
gatgttgtgtcatcctcgactccctcagagagaggaaaagatgagaaatcaaagccaaaa
gagaaccccgaggagaataagaagtgggccgtccctgtcaacataaacacaccctgcgat
gatttctataaacgcatccccaacccagctttcaagtggccgtttgagctggatgtcttc
cagaagcaggccgtgctgaggctggaggctcgcgaatccgtgtttgtagccgcgcacaca
tcagcgggcaaaacagtggtggccgaatacgccatcgccctctcacagaaacacatgacg
aggaccatctacacctctcccatcaaagccctgtccaatcagaagttcagagactttaaa
accacctttggagatgttggcctcctgacgggcgacgtccagctcagtcccgagtcttcg
tgtctcatcatgaccactgagatcctcaggtccatgctttacaacggctcagaggtcatc
cgggacttggagtgggtgatctttgacgaggttcactacatcaacgacaccgagagagga
gtcgtgtgggaggaggttttgatcatgctccccgatcacgtcagcatcattctccttagc
gccacggtgccaaatgctgtggagtttagcgagtggatcggtcggataaagaagaagcat
atctacgtgatcagcacaatgaagagacctgtgcctttggagcattatctgtacactgga
aacagcaccaagactcagaaagagatgttcctgctgctggaccctacaggaaacttcctc
actaaagggtactacgcagctgtcgatgccaagaaggagcgcaccagcaaacacgcccaa
tcgtttggcgcgaaaagtacttctcacaacaccacagctagtcaggaccgatcggtgtgg
ctcactctcctgcacttcctgtcccagcggcagcagacgccggtggtcgcgttcaccttc
tcgcggacgcggtgtgacgacaacgcccgctcgctggactccatggacatgaccacctcc
atagaaaaggccgagattcactctttcttccagaagagtctgagtcgcctccgaggagga
gaccgaaagctgcctcagatcttggtcatgagggacctgttgaagaggggaatagcagtc
catcacagcgggatcctgccgatactgaaggaggtcatcgagatgctcttctcacgaggt
ctcgtgaaggtgctgtttgccaccgagacgtttgctatgggagtgaacatgcccgccagg
actgtggtgttcgacagcatcaggaaacacgacgggaccggctttagaaacctgctgcca
ggtgagtacattcagatggcgggcagagcaggccggagaggtctggacgccacgggcacc
gtcatcattctgtgtaaagccggagttcacgacatggcagatctgcatgtcatgatgctg
ggtagacctaccaccctccagtcccagttcagactgacctacacgatgatcctcaacctg
ctgcgtgtcgaagccctgcgcgtgaccgacatgatgaggaggagcttttccgagaaccac
agggacactcaggcccaagagaagaggatcagccagctgaagcagatggtgtcttctctg
cctcctctggacaccgaaggccagctgtcggacatgttgccttactaccacacggtgacg
gagctacgaaccaccaccgaggccctccagcgcgctattctggagtccgtcaacgggctg
aaagctctgtctgtgggtcgagttgtgttggtgaacaacaagcagcatctcaacgccctg
ggagttatcctacaggtgtccagtgccgccgtgaatcgcaccttcacagctctggtcatc
tgcgagaagggcaacgaggaagaggaaggaaaagcaaacaacaacaacgctttccctcac
ctctacaacacggcgctcttcatacctgaaggcccttgcagccacacggtgcagaagttg
acgcttcaggacatctcagccatcacagtgaaaaccctcaaagtgattccggacaggatc
atcgacaactacagcaagaggcagcagccacgattcaggctcgaccctcccggccaagcc
atctccacggcgacccaggagctcctgcgattggccgaggccaaccccagcggcatggcg
accctcgaccccgtgaacgacctccagctgaagagcgtcgacgtggtggaggactccatg
aggctccgcgtgctgcagggcagcctcagagagttcaactgcatccactcgcccacgttc
gcagagcagtttgctcgggtcgaggagaggatgaaagtgcaggaggagatggacaggctg
ctgttcctggtgtcggaccagtctctgtctctgctgcctgaataccaccagaggatcaag
gtgctgcaggccctccagtacgtcgacagcggcggggcggtgcagctgaagggccgcgtg
gcctgtcagatcagctgccacgagctgctgctgaccgagctgctgttcgagaacgtcctg
agcccgctggcgcccgaggagagcgccgccctgctgtcctgtctggtattcacgcagaag
acgcaggtggagccgcacatcaccagcacactgaaggagggcatcgatcgggtgctgtca
gtggccaagcgtatcggagagctgcagagggaatgtgggataccacagacagctgaggag
tttgtcggccagttcaagttcggcctgacagaggtggtgtactgctgggccagaggcatg
ccgttcgcagagatcgcccagctgacggacgtccaggagggcacggtggtccgctgcatc
cagcgcctggacgaggtgctgaaggaggtgcgacaggccgcacgcatcgtgggagactcc
gtcctggggagcaagatggagaaggcgtccttggccatccgcagggacatcgtcttcacc
gcctccctctacacccactga
DBGET
integrated database retrieval system
