Anarhichas minor (spotted wolffish): 142965477
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Entry
142965477 CDS
T11660
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
amir Anarhichas minor (spotted wolffish)
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amir04131
]
142965477 (vps50)
Membrane trafficking [BR:
amir04131
]
Protein recycling
Others
EARP complex
142965477 (vps50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
142965477
NCBI-ProteinID:
XP_075962534
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQELIESIEEV
YFSTDSFDIVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLTMAKEGFTEASLGLLSNQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITMDSYIPCLTDLCKALWEVMLSYHRTMQWHEEQDRHETTPTADG
AAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKAKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSKRAASSTSAAQDELSLFQQYLQEGNPFEMHAENKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPIKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTHGGRDAGPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVGE
NVTVHSAAEDRKEKVPSPHLSQLVVLTNGGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNQRLQDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaaaagcccccaggaaagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccatcgacccgcaggcggagcaggagctcatcgagagcatcgaggaggtc
tacttctctaccgactccttcgacatagtgcagcacgagctggagaaactaccgcctgag
ctgaacctgcaggagctggaggagtacagggacaagctgaagagacaacaggcagcagtt
tctaaaaaggtcgccgatcttattctggagaaacagcctgcttatgtcaaggaactggag
cgagtgactgcgttacaaaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgaccatggcgaaggagggattcacagaagccagcttgggtctattgtccaat
cagaggaggcgacagctgctgacaggcctgcttaagtctctgaggaccatcaagacactg
caaagaacagatgtaagactcagcgagatgcttgaggaggaggactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagc
gaactgaattccaaactacaagacactctggagcaaatagaggagcagcttgacgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccaactggcctac
acgctgctgggcaagacacagactgctatggaccagctccacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatatgtggagctgtgtgccggcaacgcc
gataccaagttccagaagatgcagtacaaggacctgtgcacgcatatcaccatggacagc
tacattccctgcctgacagatctgtgcaaggcattgtgggaggtgatgctcagctaccac
cgcaccatgcagtggcacgaggagcaggacaggcacgagaccacgcccactgcagatggt
gccgcggcagcagagtctgatgagtctgtggtggaccgcagctacgtgaagaagaagctg
gagcacggactgacacggatctggcaggacgtccagttgaaagcgaaggcctacatcctg
gggactgacatgtcgaacttcaagtatgacgatttcatagtggtgcttgatgtcatcagc
aggttgatgcaggtgggcgaggagttctgcggcagcaagtcagaggtcctgcaggagtct
atcaagcgccagagtgtcaactactttaaaaactatcacagggcacgactggaagagctg
aggatgtttctggaaaatgagacgtgggaactttgcccagtgaagtctaactttaacatc
gcccagctccatgagtttaaattcatgggccagtgccgctctccgtccgtttccccgagc
aaacgggccgcgtcctcgaccagcgcggctcaggacgagctctctctgttccagcagtac
cttcaggagggaaaccccttcgagatgcatgctgagaacaaagaggaggagacggaggat
gtgctggcatcgaacgggtacgagtcagacgagctggagaagagtgtgtaccaagattac
gacagtgacagcgatgtccctgaggagctcaagcaggactatgttgacgagcagacgggt
gatgcccccatcaagagtgcgtcccgagagaccataagaagcaagaaaaagtccgactac
aaccttaataagaccaatgcaccgattctcaccaataccaccctcaatgtcatccggctt
gtcgggaagtatatgcagatgatgaacattctgaagccgatcgccttcgatgtcatccac
tgtgtgtcgcagctcttcgactactacctgtacgccgtgtacactttctttggacgcaat
gacatgcctgtcccaagcccgtctctgccaactcacggtggcagagacgcgggccctgcc
agggtggtgggccctgcttgcttgtatgagtcatcgggtctgggccttatcagcagcaga
ctgagaaccacactgaaccggatccaggagagcctcattgacatggaggcagtgggggag
aatgtaacggtccacagtgcagcagaggacagaaaggagaaggtgccgagcccccatctc
agccaactggtggtcctcactaacggtgggactctttatgggctcgcacagagagtggtg
gccactgagtctcttgtgtttctggccgaacagtttgaatccctccagtcccacctggac
acaatgatgcctgcagcaaagaagcctttcctgcaacagttttattcccagacggtgtct
acagccagcgaacttcggaaaccaatatactggattgttgcagcaaaggccatcgactac
gaacagatgttgctcctgatggctggcgttaaatgggacatcagagagataatgtcgcag
cataacgtgtatgtggacgtcctgttaaaggagtttgagcaatttaaccagcggttgcag
gacgtttccagacatgtgcgcatcccgctgcctgtgtccaacgtgctgtgggagcactgc
atccgcctggccaacaggactctagtagaaggctatgctaatgtgaagaaatgcagcaac
gagggccgggccctgatgcagctggacttccaacagttcctcatgaagctggagaagctg
accgacctgcgacccattcctgataaagagttcgttgagacctacatcaaggcctattac
cttactgagaatgacatggagcagttcatcaagaatcacagggagtactccatgaagcag
ctcgccaacttggtgaacgtttgtctgggttcacatataaacaagaaggctcgccagaaa
ctcctggcggccatcgatgacattgacagacccaagagatag
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