Aminobacter sp. Y103A: Amn_00050
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Entry
Amn_00050 CDS
T09420
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amis
Aminobacter sp. Y103A
Pathway
amis03030
DNA replication
amis03430
Mismatch repair
amis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amn_00050
03430 Mismatch repair
Amn_00050
03440 Homologous recombination
Amn_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amis03032
]
Amn_00050
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_00050
Enzymes [BR:
amis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amn_00050
DNA replication proteins [BR:
amis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amn_00050
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amn_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBD35125
LinkDB
All DBs
Position
2964..3677
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AA seq
237 aa
AA seq
DB search
MREIIFDTETTGLDNREDRVIEIGAIEMINRFPTGNTFHKYINPQGRQVHPDAQDVHGIS
NADLEGKPTFPEIIDEFLEFIDGAKLVAHNGTFDLGFINAEFARLEQPAIQADRLIDTLA
LARRKHPMGPNSLDALCRRYGIDNSRRTKHGALLDSELLAEVYIELIGGKQSALVLESFS
SGNGGGNTRQIEIVVATRPEPLPPRLTEAELAAHDKLVGGLGEKALWAKLLAPAEPS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagatcattttcgataccgaaaccaccggcctcgacaaccgcgaggaccgtgtg
atcgaaatcggcgcgatcgagatgatcaatcgcttcccgaccggcaacaccttccacaaa
tacatcaacccgcaggggcgccaggtccaccccgacgcgcaggacgtgcacggcatctcc
aacgccgatctcgaaggcaaaccgaccttccccgagatcatcgacgaatttctcgagttc
atcgatggcgccaagctcgtcgcccataacggcaccttcgatctcggtttcatcaatgcc
gaattcgcccggctcgagcagccggcaatccaagccgaccgtctcatcgatacgctggcg
ctggcccgccgcaagcacccgatgggcccgaattcgctcgacgcattgtgccggcgctac
ggcatcgacaacagccgccgcaccaagcacggcgctttgctcgactccgaactgctggcc
gaagtctacatcgaactgatcggcggcaagcagtcggcgctggtgctggagagtttttcg
tcaggcaatggcggcggcaacaccaggcagatcgagattgtcgtcgccacgcgccccgag
ccgttgccgccgcgcctgaccgaggccgagctcgccgcccacgacaagctcgtcggcggc
cttggcgaaaaggccctttgggccaagctgctggcgcccgccgaaccgagctga
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