Aminobacter sp. Y103A: Amn_00420
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Entry
Amn_00420 CDS
T09420
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
amis
Aminobacter sp. Y103A
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_00420
Enzymes [BR:
amis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amn_00420
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Amn_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_16
NPHP3_N
Exo5
Motif
Other DBs
NCBI-ProteinID:
BBD35162
LinkDB
All DBs
Position
37497..41027
Genome browser
AA seq
1176 aa
AA seq
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MKKAFFVPNETAERQARASDPGNSVWVSANAGSGKTHVLSQRVMRLLLRGTDPSKILCLT
YTRAAAANMSNRVFANLSEWTMLADAELAARITALDGVRPDAAKLRRARRLFAEALETPG
GLKIQTIHAFCESVLHQFPLEANIAAHFEMLDSQMEATLFATARRDMVTGAGEHNPELAE
AFAKVLERGGEAGLDALLAEIVRKRDGLRAFIAQVQDFNFEALYEEFGFSPRDSAEAIAA
SIWPLPGFEPTFFTEFAIAAEATDARSVLNNILPYARLAYAEADPMRRLSLLCNAFLKAD
GDPYNPSSAFKKALLDRLPDLPERYAATAAAIIEAADRLAHFRMLEATQAALTIADWLIA
RYERLKTGRGFLDFNDLITRTVNLLARPDAGPWVQYKLDKGIDHILLDEAQDTSPDQWEV
VKRLAEEFFSGFSARDIVHRTVFAVGDEKQSIYSFQGAAPESFDNSKHEFAGRIRDADAR
FEDVTLTWSFRSTDDVLSAVDRVFEDTSVRRGVTRAPEPPSHKAIRAGAAGYVEVWPSVG
ADAVDEPDDWRKPIDHAHAPAVVVAEQVAATIRKWLDEREVIEGTGKRLRAGDVMVLVRK
RDRFVHALSRALKRRDIPVAGADRLSLPGHIAVKDLIALGRFLIQPEDDLSLAAVLRSPI
FGMSEDALFVLSANRGKGRSLIASLRDHAARDAVFAEAAAVLEAWATEAAFRPIFEFYSG
VLSGGPSRDGVRKKMISRLGQEAGDILDEFLNFCLAEERTGLPGLESFLSTLESAGPEIK
REMDQTRDEVRIMTVHAAKGLEAPVVFLVDSGSAPFSDQHLPRLMPFVPQGRHWQGKGYL
WRAGADVANAFSKGASALARDLADDEYRRLLYVGMTRAEDRLIICGYHGKRQPGLNTWHS
IVSRALSVAPESAERGHPVITDRPVHRFRVTPLPATPLSAPEPAASERARIEPLPESLFG
APPAFEDLPRPLSPSGASALIEETQEAVISGRSPVLDAEGEPGFAVARGSALHRLLQMLP
RLDAEIRQSAAERYLVRVGQDWPDAERASALASVLAVLDDPRFSPLFSPSSRAEVSVMGS
LVVRGKPRSVSGKIDRLAVTDSEVLIVDYKTNRPPPASFEQVPNAYVVQLALYRALLRPL
YPGKTVAAALLFTEAPRLIAVPAEAMDAALVRLTQA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcgttcttcgtccccaacgagacggcagagcgccaggcgcgcgcctccgat
ccgggcaattcggtctgggtgtcggccaatgccggctccggcaagacgcacgtgctgtcg
cagcgcgtgatgcggcttttgctgcgtggcaccgatccatcgaagatcctgtgcctgact
tatacccgcgccgccgccgccaacatgtcgaatcgcgtcttcgccaacctgtcggaatgg
acgatgttggccgacgccgagttggccgcacgcatcacggcactcgacggtgtccgccct
gacgctgccaagctgcgccgcgcgcgccgattgttcgccgaggcgctggaaacgccgggc
gggctgaagatccagaccatccacgccttctgcgagtcggtgctgcaccagttcccgctc
gaggccaacatcgccgcccatttcgagatgctcgacagccagatggaggcgactttgttc
gccaccgcgcggcgcgacatggtcaccggcgccggcgagcacaatcccgaactcgccgag
gccttcgccaaggtgctggagcgtggcggcgaggccgggctcgatgcgctgctcgccgag
atcgtgcgcaagcgcgatgggctgcgcgccttcatcgcccaggttcaagacttcaatttc
gaagcgctctacgaggagttcggtttttcgcccagggacagtgccgaggccatcgccgct
tcgatctggccgctgccgggcttcgagccgaccttcttcaccgaattcgccatagcagcc
gaagccacagacgcgcgcagcgtgctgaacaatatcctgccttacgcccggctcgcctat
gccgaggccgaccccatgcgccggctgtcgcttctgtgcaatgccttcctcaaggccgac
ggcgatccgtacaatccgtccagcgcgttcaagaaggctttgctcgaccggctgccagat
ttgcccgagcgttatgcggcgacggcagcggccatcatcgaggcagccgaccggctcgcc
cattttcgcatgctggaggcaacgcaggcggcactgacgatcgccgactggctgattgcc
cgctacgagcggctgaagaccggccgcggcttcctcgatttcaacgacctgatcacccgc
accgtcaacctgctcgcgcgtcccgacgccgggccgtgggtgcagtacaagctcgacaag
ggcatcgaccacatactgctcgacgaagcccaggacaccagccccgaccaatgggaagtg
gtgaagcggctggcggaagagttcttctccggcttcagcgcccgcgacatcgttcaccgc
acggtcttcgccgtcggcgacgagaagcagtcgatctattcgttccagggtgccgcgccc
gaatccttcgacaactccaagcacgaattcgccggccgcatccgtgatgccgatgcccgt
ttcgaagacgtcacactgacctggtcgttccgctcgacagacgacgtgctgtcggccgtc
gaccgtgtcttcgaggacacgagcgttcgtcgcggcgtcacccgcgcgcccgagccgccg
agccataaggcgatccgcgccggggcggcaggttacgtcgaggtctggccctcggtcggc
gccgatgccgtcgacgagcccgacgactggcgcaagcctatcgaccatgctcatgcgcct
gccgtggtggttgctgaacaggtcgccgccaccatccgcaaatggctcgacgagcgtgag
gtcatcgaaggcaccggcaagcgcctgcgcgcgggcgacgtcatggtgctggtgcgcaag
cgcgaccgcttcgttcatgcgctgtcgcgggcgctgaagcgccgcgacatcccggtagcc
ggcgccgaccggctgagcctgcccggccatatcgcggtcaaggacctgatcgcgcttggg
cgtttcctgatccagccggaggacgacctgtcgctggccgccgtgctgcgtagcccgatc
ttcggcatgtcggaagatgcgctgtttgtgctctcggccaatcggggcaaaggaaggtcg
ctgatcgcctcgctgcgcgatcatgcggcgagagatgctgttttcgccgaggcggccgcc
gtccttgaggcctgggcgacggaggctgccttccggccgatcttcgagttctattcgggc
gtgctgtcgggcggacccagccgcgacggcgtgcgcaagaagatgatctcgcgccttggc
caggaggccggcgacattctcgacgagttcctgaatttctgcctggccgaggagcgcacc
ggcctgcccggtctcgaatcgttcctgtcgacgctcgaaagtgccggccccgagatcaag
cgcgagatggatcagacgcgtgacgaggtccgcatcatgaccgtacacgccgccaagggt
ctggaggcgccggtggtgttcctcgtcgacagcggctcggccccgttcagcgatcagcat
ttgccgcgcctgatgcctttcgtcccgcaaggccgacactggcagggcaagggttatctc
tggcgcgctggcgccgatgtcgccaacgccttctcgaagggtgccagcgcgttggcccgc
gatctcgccgacgacgaataccggcgcctgctttatgtcggcatgacccgcgccgaggac
cggctgatcatctgcggttatcacggcaagcgccagcccggcctcaacacctggcattcg
attgtcagccgtgcgttgtcggtggcgcccgaaagcgcggagcgcggccatcccgtcatc
acggacaggcctgtccaccgcttccgcgtcacgccattgcccgcaacgcctttgtcggcg
ccggaaccggcggccagcgagagagcccgcatcgagcccttgccggaaagcctttttggc
gcgccgccggccttcgaggatttgccgcggccgctgtccccgtcgggcgcttcggcgctg
atcgaggagacgcaggaggccgtgatctcgggccgctcgccggtgctcgacgccgagggc
gagccgggctttgccgtcgcccgcggctcggccttgcaccggctgttacagatgctgccg
cggctcgacgccgagatacgccagtccgccgccgagcgctacctcgtccgtgtcggccag
gactggccggatgcggagcgtgccagcgcgctcgcatccgtgcttgcagtcctcgacgac
cccaggttttcgccgctgttttcgccctcctcgcgcgccgaagtgtctgttatgggcagc
ctcgtggtcaggggaaagccgcgctcggtgtcgggcaagatcgaccgcctggcggtcacc
gacagcgaggtgttgatcgtcgactacaagaccaaccggccgccacccgcctcgttcgag
caggtgccaaacgcctatgtcgtgcagcttgcgctctaccgcgcgctgctccggccgctc
tatcccggcaagacggttgccgcggccctgctgttcacagaggcgccgcggctgatcgcc
gtaccggccgaggcgatggatgccgcccttgttcgactcacccaagcgtga
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