Aminobacter sp. Y103A: Amn_04530
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Entry
Amn_04530 CDS
T09420
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amis
Aminobacter sp. Y103A
Pathway
amis03030
DNA replication
amis03410
Base excision repair
amis03420
Nucleotide excision repair
amis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amn_04530
03410 Base excision repair
Amn_04530
03420 Nucleotide excision repair
Amn_04530
03440 Homologous recombination
Amn_04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amis03032
]
Amn_04530
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_04530
Enzymes [BR:
amis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amn_04530
DNA replication proteins [BR:
amis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Amn_04530
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Amn_04530
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amn_04530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
Taq-exonuc
HHH_2
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BBD35573
LinkDB
All DBs
Position
complement(493351..496332)
Genome browser
AA seq
993 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLMLDARNTEAGVV
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLIPQFGLIRQATKAFDLPCIEMEGFEA
DDLIATYARLACEAGGDTTIVSSDKDLMQLVGPSVSMYDPMKDRQINIPEVIEKWGVPPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDTLLARASEIKQDKRRQSIIDNT
EKARISRELVRLKIDVPVTDGLEDFVLQPPNGPKLIGFLKTMEFTSLTRRVAEATGTEAG
EIEAVPVSVQWGADAHGPDVGAGATPAAAPAAGPAARANGGSISAAVPPSAPADGGTALD
TPTDLANKIAAAAVSEKFDHAAYVTIRDLATLKAWVAEATEAGVMAFDTETSSLDPMQAE
LVGISFATAPGRAAYVPLAHKSGRGDLLGGGLVENQIPVRDALATLKPLLEDRSVLKIAQ
NLKYDLVVMNRHGVDISPFDDTMLLSYVLDGGTNGGHGMDPLSEKWLGHTPIAFKDIAGS
GKNFVGFDQVDIDKATAYAAEDADVTLRLWRVLKPRLAAKGLTSVYERLERPLVPVLAEM
EQRGISVDRQILSRLSGELAQGAARLEDEINTLAGERFNIGSPKQLGDILFGRMGLPGGT
KTKTGQWSTSAQVLEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGFINPETKRVHTSY
ALAATTTGRLSSSDPNLQNIPIRTAEGRKIRTAFIADKGNKLISADYSQIELRVLAHVAD
IAQLKQAFADGVDIHAMTASEMFSVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSI
PREEASDYIKKYFERFPGIRAYMDETKAFCRDNGYVETIFGRRIHYPEIRSSNPSVRAFN
ERASINARLQGTAADIIRRAMIRMDDALIAAKLSARMLLQVHDELIFETVENEVAATIPV
VRHVMENAAMPAASMSVPLHVDANAADSWDEAH
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctagtcgacggctccggctacatcttccgcgcctat
cacgcgctgccgccgctgacccgtaagtcagacggcctgccggtcggcgcggtgtccggt
ttctgcaacatgttgtggaagctgatgctcgacgcgcgcaacaccgaagccggcgtggtg
ccgacccatttcgccgtcatcttcgactattcgtccaagaccttccgcaacgagctctat
cctgaatacaaggccaaccgctcggcgccgccagaagacctgatcccgcaattcggcctg
atccgccaggcgacaaaagctttcgacctgccctgcatcgagatggagggattcgaggcc
gacgacctgatcgcaacctacgccaggctcgcctgcgaggcaggcggcgacaccaccatc
gtctcgtccgacaaggacctgatgcagctcgtcggtcccagcgtgtcgatgtacgaccca
atgaaggatcggcagatcaacattcccgaggtcatcgagaagtggggcgtgccaccggag
aagatgatcgacctgcaggcgctgaccggcgactcggtcgacaacgtgccgggcgttccc
ggcatcggcccaaagacggcagcacaattgctcgaacagttcggcgacctcgacacgctt
ctcgcccgcgcctccgagatcaagcaagacaagcgccgccagtcgatcatcgacaacacc
gaaaaggcgcgcatttcgcgcgagctggtgcggctcaagatcgatgtgccggtgaccgac
gggctcgaagatttcgtgctgcagccgcccaacgggccgaagctgatcggcttcctcaag
acgatggaattcacgtcgctgacgcgccgcgtcgccgaggccacgggcaccgaggcgggc
gagatcgaggccgtgccggtatcagtgcaatggggcgccgacgcgcatggaccggacgtc
ggagcgggcgcaacacctgcagcggcacccgccgcaggtcccgccgcgcgtgcgaacggc
ggcagcatctctgccgcagtgcccccgtccgcccctgccgacggcggcaccgcgctcgac
acgcctaccgacctcgccaacaagatcgctgcagccgcagtctcggaaaaattcgaccac
gccgcctatgtcacgatccgtgacctcgcgacactgaaggcctgggtggccgaagcgacc
gaggccggcgtcatggcattcgacaccgagaccagctcgctcgatccgatgcaggccgag
ctcgtcggcatttctttcgccaccgcaccgggacgcgccgcctatgtgccgctcgcccat
aagagcggacgcggcgacctgctcggcggtggcctggtcgagaaccagattccggtgcgc
gacgccctagccactctcaagccgctactcgaagaccgttcggtgctgaagatcgcgcag
aacctgaaatacgacctggtggtgatgaaccgccacggcgtcgacatcagtccgttcgac
gacacgatgctgttgtcctacgtgctcgacggcggcaccaatggcggccacggcatggac
ccgctgtcggaaaaatggctcggccacacgccgatcgccttcaaggacatcgccggctcg
ggaaagaacttcgtcggcttcgaccaggtcgacatcgacaaggcgaccgcctatgccgcc
gaggatgccgacgtgacactgcgcttgtggcgcgtgctgaagccacgcctcgccgccaag
gggctgacctcggtctacgagcggctggagcgcccgctggtgccggtgttggccgagatg
gagcagcgcggcatctcggtcgacaggcagatcctgtcgcggctgtcgggcgagctcgcc
cagggtgccgcgcggcttgaagacgagatcaacacgcttgccggcgagcgcttcaacatc
ggatcgcccaagcagctcggcgacatcctgttcggccgcatgggcctgcccggcggcacc
aagaccaagaccggccagtggtcgacctcggcgcaggtgctcgaggatctcgccgccgaa
ggccacgagctgccgcgcaagatcgttgattggcgccagctgaccaagctgaaatcgacc
tataccgacgccctgcccggtttcatcaaccccgagaccaaacgcgtccacacctcctac
gcgctggccgccaccaccaccggccggctgtcgtcgtcggatcctaacctgcagaacatt
ccgatccgcaccgccgaaggccgcaagatccgcaccgccttcatcgccgacaagggcaac
aagctgatctcggccgactacagccagatcgagctgcgcgtgctagcccatgtcgccgac
attgcccagctcaagcaggctttcgccgacggcgtcgacatccatgccatgacggcatcc
gaaatgttctcggtgccggtcgagggcatgccgtcggaagtgcgccgccgcgccaaggca
atcaacttcggcatcatctacggcatctcggccttcggcctcgccaatcagctgtcgatc
ccgcgcgaggaagcgtccgactacatcaagaagtatttcgagcgcttccccggcatccgc
gcctatatggacgagaccaaggcgttctgccgtgacaacggctatgtcgagaccatcttc
ggccgccgcatccactatcccgaaatccgctcttcgaacccgtcggtacgcgccttcaat
gaacgcgcctcgatcaacgcccgcctgcaaggcaccgcagccgacatcatccgccgggcg
atgatccgcatggacgacgcactgatcgcggccaagctgtcggcgcgcatgctgctccag
gtacacgatgaactgatcttcgaaactgtcgagaatgaggtcgcagcgacgatccctgta
gttcggcacgtgatggagaacgcggccatgccggccgcgtcgatgtcggtgccgctgcat
gtcgacgccaacgccgccgacagctgggacgaagcgcactga
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