Aminobacter sp. Y103A: Amn_09080
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Entry
Amn_09080 CDS
T09420
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
amis
Aminobacter sp. Y103A
Pathway
amis00071
Fatty acid degradation
amis00280
Valine, leucine and isoleucine degradation
amis00310
Lysine degradation
amis00362
Benzoate degradation
amis00380
Tryptophan metabolism
amis00410
beta-Alanine metabolism
amis00640
Propanoate metabolism
amis00650
Butanoate metabolism
amis00907
Pinene, camphor and geraniol degradation
amis00930
Caprolactam degradation
amis01100
Metabolic pathways
amis01110
Biosynthesis of secondary metabolites
amis01120
Microbial metabolism in diverse environments
amis01200
Carbon metabolism
amis01212
Fatty acid metabolism
Module
amis_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Amn_09080
00650 Butanoate metabolism
Amn_09080
09103 Lipid metabolism
00071 Fatty acid degradation
Amn_09080
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Amn_09080
00310 Lysine degradation
Amn_09080
00380 Tryptophan metabolism
Amn_09080
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Amn_09080
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Amn_09080
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Amn_09080
00930 Caprolactam degradation
Amn_09080
Enzymes [BR:
amis01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Amn_09080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Amn_09080
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Amn_09080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
F420_oxidored
FAD_binding_3
2-Hacid_dh_C
ApbA
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
Pyr_redox_2
Rad60-SLD
NAD_binding_8
BTB
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBD36028
LinkDB
All DBs
Position
952145..954364
Genome browser
AA seq
739 aa
AA seq
DB search
MTYTNFTVETDADGIALVTWNMPDRSMNVFTEEVMGELDKIIDQVVADAGIKGAVITSGK
ETFSGGADLTMLQKMLGIYAKEKSKDPEKAARLLFDNAGRMGALWRKLETCGKPWVSAIN
GTCMGGAFELSLACHGRVAADSDKVKMALPEVKVGIFPGAGGTQRVPRLADPQSALQMLT
SGQTLSPQKAKGMNLIHEIAEPKKLIETAKAMIRNGLKPVQPWDEKGFKLPGGPVYSAAG
ANLWPPAIAILRRETYGNYPAATAILKCVYEGLLVPFDTGLRIEQRYFTEIMQTREAAAM
IRSLFVSLQELNKGARRPEGIADTKFKKIGIIGAGFMGAGIAFVTAKAGIPVVLVDRDQE
AADKGKAHSDSLISDQVKKGRAKPEEREKLLSLITPSADYADLAGCDLVVEAVFEDSEVK
KATTEKAEAVLKSSAVFASNTSTIPITSLGKNSVRPKNFIGIHFFSPVDKMMLVEIILGK
KTGDKALAVAMDFVRAIKKTPIVVNDTRGFYVNRCVLRYMSEAFKMLIEGVPAAMIENAA
KAAGMPVGPLALTDETAVDLAQKIMKQTIRDLGEKAVDPRQMALINTMVDSHGRLGRKNT
KGFYDYPAKPAKKKLWPGLKDLYPQLAPEKVDVEEIKQRLLSVIALEAVRVMEEGIVTDP
READVGSILAFGFAPYTGGALSYIDGIGAKKFVKIAKDLQKKYGAEFKAPKLLVDMAEKG
ETFYQRFDPYAKAEEKKAA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgacctataccaacttcacggtcgaaaccgatgccgatggcatcgcgctcgtcacctgg
aacatgcccgaccgctcgatgaacgtcttcaccgaagaggtgatgggcgagctcgacaag
atcatcgaccaggtcgtcgccgacgccggcatcaagggcgccgtcatcacctcgggcaag
gagaccttctccggcggtgccgacctcaccatgctgcagaagatgctcggcatctatgcc
aaggagaagtccaaggatccggaaaaggcagccaggctcctgttcgacaatgccggccgc
atgggcgcgttgtggcgcaagctcgaaacctgcggcaagccgtgggtgtcggcgatcaac
ggcacctgcatgggcggcgcatttgaattgtccctggcttgtcacggccgcgtcgcggct
gactcggacaaggtcaagatggccctgccggaagtgaaggtcggcatcttcccgggcgcc
ggcggcacccagcgcgtgccgaggcttgccgacccgcagtcggcgctgcagatgctgacc
tcgggccagacgctgtcgccgcagaaggcgaagggcatgaatctgatccacgagatcgcc
gagccgaagaagctgatcgagaccgccaaggcgatgatcaggaatggcctgaagccggtc
caaccctgggacgagaagggcttcaagctgcccggcggtcccgtctattctgccgcaggc
gccaatctctggccgccggcaatcgccatcctgcgccgcgagacctatggcaactatccg
gctgcgacagcgatcctgaaatgcgtctatgaaggccttttggtgccgttcgacaccggc
ctgcggatagagcagcgctacttcaccgagatcatgcagaccagggaagcggcagcgatg
atccgctcgctgttcgtgtcgctgcaggagctgaacaagggcgctcgccgtcccgaaggc
atcgccgataccaagttcaaaaagatcggcatcatcggcgccggcttcatgggggcgggc
atcgcctttgtcaccgccaaggccggcattcccgtggttctggtcgaccgggatcaggaa
gccgccgacaagggcaaggcgcactccgacagcctgatctccgaccaggtcaagaaggga
cgggccaagccggaggagcgcgagaagctcctgtcgctgatcacgccgagcgccgactat
gccgacctcgccggctgcgacctggtggtcgaggcggtgttcgaggattcggaagtcaag
aaggcaacgaccgagaaggcggaagccgtgctcaagtcgtcggcggtgtttgcctccaac
acctcgacaataccgatcacctcgcttggcaagaactcggttaggccgaagaacttcatc
ggcatccacttcttctcgccggtcgacaagatgatgctggtcgagatcatcctgggcaag
aagaccggcgacaaggcgcttgcggtggcgatggacttcgtccgcgccatcaagaagacg
ccgatcgtcgtcaacgacacgcgtggcttctacgtcaaccgctgcgtgctgcgctacatg
tcggaagccttcaagatgctgatcgaaggcgtgccggcagcgatgatcgagaacgccgcc
aaggctgccggcatgccggtcggcccgctggcgctgaccgacgagaccgccgtcgacctc
gcccagaagatcatgaaacagaccatccgggacctcggcgagaaggctgtcgatccacgc
cagatggcgctgatcaacaccatggtcgacagccatggtcgcctcggccgcaagaacacc
aagggcttctacgattacccggcaaaaccggcgaagaagaagctgtggcccggcctcaag
gacctctatccgcagcttgctccggagaaggtcgatgtcgaggagatcaagcagcgcctg
ctgtcggtcatcgcgctcgaagccgtgcgcgtgatggaggagggcatcgtcaccgacccg
cgcgaggcggatgtcggctcgatcctcgccttcggcttcgcgccctacaccggcggtgcg
ctgtcctacatcgacggcatcggcgccaagaagttcgtcaagatcgccaaggacctgcag
aagaagtacggcgccgagttcaaggcgcccaagctgctggtcgacatggccgagaagggc
gagaccttctaccagcgcttcgatccttacgcgaaggcagaggaaaagaaggcggcctga
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