Aminobacter sp. SS-2016: Amn_10340
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Entry
Amn_10340 CDS
T09420
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
amis
Aminobacter sp. SS-2016
Pathway
amis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Amn_10340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amis03000
]
Amn_10340
Transcription factors [BR:
amis03000
]
Prokaryotic type
Helix-turn-helix
Other families
Amn_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
AAA_3
MCM
bpMoxR
AAA_30
TIP39
AAA_16
Toxin_29
Motif
Other DBs
NCBI-ProteinID:
BBD36154
LinkDB
All DBs
Position
complement(1082076..1083899)
Genome browser
AA seq
607 aa
AA seq
DB search
MDDHMHDTRNCEQSARQISSRCISLPKMKSPNSKSEMNNVVPIVPLHERAPDIFETSTAL
TAPSGLEATLANVVDLLPSLVQVRHGIISLCDGAGIPDMTVGAGWSEGSDERYRKHLPRA
AIDQIITTGMALVAENIALDPAFNAADKEVLGASDNMKVSFIGVPIRVDANVVGTLTIDR
ILDNKSGSLLDYDLRLLTTIANLVGQTVKLHRLFASDRERLMAEKIRMQKQFGELKQPGH
EGKRAHVKGIIGDSPALRGLLEKVALVARSNSTVLLRGESGTGKELVAKAVHEMSGRAKR
PFIKLNCAALPETVLESELFGHEKGAFTSAFNSRKGRFELADKGTLFLDEIGEISASFQA
KLLRVLQEQEFERVGSNQTIKVDVRVIAATNRNLEDAVARNEFRADLYYRISVVPLLVPP
LRERRGDIPLLAAEFLKNFNSENGRTMVFDASATEVLMNCAFPGNVRELENCVQRTATLA
AGASIGRNDFDCCHGRCLSAMLWKHASKETAPKSEPIAPLPLNPAMQSSGAFASAAIGVP
HDDSEQALPAPVRLGLVSDAKMTDRERLIAAMERSGWVQAKAARLLGLTPRQIGYALRKY
GIEIKNL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcacatgcacgatactcgcaactgcgagcaaagtgccaggcagatctcgtcg
cgctgcatatcgcttccaaaaatgaaaagccctaattcaaagtccgagatgaataacgtg
gtccctattgtgccgttgcacgagagggcgccggacatctttgaaacgtcgacagcgctc
accgctccctctgggctggaagccacgttggccaacgtcgtcgacctcctgccatcgttg
gtgcaggtgcggcacggcatcatctcgctctgcgacggtgccggcataccggacatgacc
gtcggcgccggctggagcgaaggcagcgatgagcgctaccgcaagcatctgccacgggcg
gcgatcgaccagatcataacgacgggcatggcgctcgtcgccgagaacatagcgttggat
ccggctttcaacgccgccgacaaggaggtgctcggggcgtccgacaacatgaaagtgtcg
ttcatcggcgtacccattcgcgtcgatgcgaacgtcgtgggcacgctgaccatcgaccgc
atcctggacaacaaatcaggctccctcctcgattacgacctgcgcctccttaccacaatc
gctaatctggttggacagacagtgaagctgcatcgcctgttcgcgtccgaccgcgagcga
ctgatggccgaaaaaatccggatgcaaaagcaattcggcgaactcaagcagcctgggcat
gagggcaaaagggctcatgtcaaggggatcattggcgacagcccggcgctgcgcgggctg
cttgagaaggtcgcgttagtagccaggtccaacagcaccgttttgctgcgcggggaatcg
gggaccggcaaggagctggtcgccaaggccgttcacgagatgtcgggacgcgccaagcgg
ccgttcatcaagctcaattgcgcagcgctccctgagacagtcctggaatccgaactgttc
ggtcacgaaaagggtgcctttaccagtgcattcaactcgcgcaaggggcgctttgagctc
gccgacaagggaacgttgtttctggacgagatcggtgagatttcggcctcgttccaggca
aagctgctgcgcgtgctgcaggagcaggagttcgagcgcgtcggcagcaaccagacgatt
aaggtcgacgttcgcgtgattgccgccacgaacaggaacctggaagacgcggttgcaagg
aacgagtttcgcgccgacctttattatcgcatcagcgttgttcccttgctggtgccgcca
ttgcgcgaaaggcgcggtgatattccgctccttgctgctgagtttctcaagaatttcaac
agcgagaacggccgtacgatggtcttcgatgcgagtgcgactgaagtgctgatgaactgt
gcttttcccggaaatgtccgcgagcttgaaaattgcgtgcagcggacggcgaccctggca
gcgggagcgtcaatcggcagaaacgactttgactgctgccatggccgatgcctttccgcg
atgctatggaagcacgcatcgaaggagactgcgccgaaatcggagccgatcgcaccattg
ccactgaacccggccatgcaatcgtctggtgcttttgcttcggccgccattggggtcccg
catgacgacagcgagcaggcactgccagcgcctgttcggctaggcctcgtaagcgacgcg
aagatgaccgatcgcgagcgtctcatcgcggccatggaaagatccggctgggtacaggca
aaggcagcgcgcctgcttggactgacgccgcgccagattggttacgcgctgaggaaatac
ggtatcgagatcaagaatctctga
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