Aminobacter sp. SS-2016: Amn_10490
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Entry
Amn_10490 CDS
T09420
Name
(GenBank) nif-specific regulatory protein NifA
KO
K02584
Nif-specific regulatory protein
Organism
amis
Aminobacter sp. SS-2016
Pathway
amis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Amn_10490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amis03000
]
Amn_10490
Transcription factors [BR:
amis03000
]
Prokaryotic type
Helix-turn-helix
Other families
Amn_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA_2
Mg_chelatase
AAA
AAA_3
AAA_16
MCM
BrxC_BrxD
TIP49
AAA_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBD36169
LinkDB
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Position
complement(1102134..1103885)
Genome browser
AA seq
583 aa
AA seq
DB search
MLPDQVGEIVSRNTPPEPAVEAARNADSLLGGIYEISKILTAPTRLEITLANVANILSSF
VQMRHGAIVVLDAEGEPQISATTGGAVPQSAIGSVIPQAVIDKIVATGVPIVIQDTSTSE
LFQADPQSTSGTIATAFIGVPLKAEEKIFGTLSIDRVRNGTTKFRYEEDLRFLAMVANLV
GRTIRLHRTLSTAGQRLIEKQPRPEQSLDEDRTHPARHPHVKIDGIIGESPALKQVLEIV
SVVARTNSTVLLRGESGTGKEFFAQAIHKLSHRREKSFVKLNCAALPESVLESELFGHEK
GAFTGAILQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTRTLKVDV
RLICATNKDLEMAVRNGEFRADLYYRINVVPIVLPPLRERPGDIPRLAKALLDRFNKENH
RDLAFTPSALDLISQCYFPGNVRELENCVRRTATLARSMTITPSDFACQNSQCLSSLLWK
GVGRSHGAYAVDEFARGNMMPVGSPLPAMRVGPSQNEASPGETCDPNHPACPAINQRLTE
RDRLIDAMEKAGWVQAKAARFLGLTPRQVGYALRRHHIEVKKF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagatcaggtcggtgaaattgtatctcggaacaccccgcctgaacctgcggtc
gaagcggcgcgcaatgcggacagcttgctcgggggaatctacgagatatcgaagattctg
actgccccgacccggctggagattacgcttgccaatgtcgcgaatatcctctcctcgttt
gtgcaaatgcgtcatggcgcaattgtcgtcctggacgctgaaggagagccgcagattagc
gcaactaccggcggcgctgtgcctcagtcagccatcggcagtgtcataccccaggccgta
atagacaaaatcgtcgctactggagtgccgatcgtcatacaagacacaagcacgtcggag
ctgtttcaggccgatcctcaatcgaccagcggcacgatcgcaactgcgtttatcggtgtc
ccgctaaaggctgaggaaaagatcttcgggacgctgtcgatcgaccgggtcaggaacggt
accaccaagttccgttacgaggaggacttacgtttcctggccatggtcgccaatctggtc
ggccggaccatccgcctgcatcgcactttgagcacggctggtcagcgacttatcgagaag
caaccgagaccagagcaatcgctcgacgaggacaggacccatccggcccgacatccgcat
gtcaagatcgacggaatcatcggagaaagtcccgcactcaagcaagtgctggagatcgtc
tcggtcgtggccaggaccaattccaccgtgcttctgcgaggcgaaagcggtaccggcaag
gagttctttgcacaggccatccataagctttcgcatcggagggagaaatccttcgtcaaa
ttgaactgcgccgcattgcccgaaagcgtcttggaatcggagctctttggccacgagaag
ggcgccttcaccggggctatcctgcagcgcgccggccggttcgaattggcgaatggcgga
accctgctgcttgatgaaatcggcgagatttcgcctgcctttcaagccaagctgttgcgc
gtcttgcaggaaggagaacttgagcgagtgggcggcaccaggaccctaaaggttgacgtg
cggctcatatgcgccaccaacaaggacctcgagatggctgtccggaatggagagttcagg
gccgacctttattaccgcatcaatgtggtgccaatagtcttgcctcccctcagagagcgg
ccgggcgatattccacgccttgccaaagctctcctcgatagattcaacaaggagaaccat
cgcgatcttgccttcacgccgtcggcgcttgacctgatctcgcaatgctatttccctggc
aacgtgcgtgagttggagaattgtgtgcgacggacggccacacttgcgcgttcaatgaca
ataactccgtcggatttcgcctgccagaacagccagtgcctttcttcgcttctgtggaaa
ggagtcggccgttcgcacggcgcctatgccgtcgacgagttcgcacgtggcaatatgatg
ccggttggatcgccgctgcctgccatgcgagtcggcccctcccagaatgaggcatcgccc
ggcgagacctgcgaccccaaccatccagcttgcccagcaatcaaccagcgtctgacggaa
cgcgaccgactgatcgatgcgatggagaaagccggctgggttcaggccaaggcggctcgt
ttcctcggtctcacgccgcggcaggtcggctatgctctgcgccggcatcatatcgaagtg
aagaagttctaa
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