Aminobacter sp. SS-2016: Amn_13080
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Entry
Amn_13080 CDS
T09420
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
amis
Aminobacter sp. SS-2016
Pathway
amis00900
Terpenoid backbone biosynthesis
amis01100
Metabolic pathways
amis01110
Biosynthesis of secondary metabolites
Module
amis_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Amn_13080
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amis01006
]
Amn_13080
Enzymes [BR:
amis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Amn_13080
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Amn_13080
Prenyltransferases [BR:
amis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Amn_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
BBD36428
LinkDB
All DBs
Position
1381395..1382360
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AA seq
321 aa
AA seq
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MQTDSTLHDDAQARGASGRLPSEIWMQDGARRVEQALARLLCAEDDGETELMAAMRYATL
HGGKRTRALLCLATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTV
HVKFGEATAILVGDALQAHAFLTLASLDAPSDNRIALVRELAQAVSAEGAAGGQAMDLSL
VGKHVELDRIVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQV
VDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQAARQLALDLLRDAGEAIPPLGTRA
ERLAQMLQRANAYLFKHAPCA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgattccacgctacacgacgacgcgcaggcgcgcggcgcatccggcaggctg
ccgtcggagatctggatgcaggacggcgcaaggcgggtcgaacaggcgctggcgcgtctt
ctctgcgccgaagacgacggtgagaccgagctgatggcggcgatgcgctacgccaccttg
catggcggaaagcgcacccgcgccttgctctgtctggctaccggcgcactggccgacacg
ccggcgcccatgctcgacgatgtcggcgccgccatcgagatgatgcacgcctgtaccctg
gtccacgacgacctgcccgcaatggacgatgacgtgcttcgccgcggccttccgaccgtg
cacgtcaagttcggcgaagccactgcgatcctggtcggcgatgcgctgcaggcgcacgcc
ttcctgaccctggcgagcctggatgcgccgagcgacaaccgtatcgcgctcgtgcgcgaa
ctggcgcaggcggtgtccgccgagggtgccgcaggcgggcaggccatggatctgtcgctg
gtaggaaagcacgtcgagctggaccggatcgtggcgatgcaccggatgaagagcggagca
ctagtgcgcgcgtccgttcgcatgggcgcgctatgcgccatcgcggaggatgccgcccac
gctgcgctgtactgtgcgctcgatcgctactccgcctgtttcggcctggcgttgcaggtg
gtcgacgacattctcgacgcgacagcggataccgcgacgttgggcaagacccccggcaag
gacgcggcggcgcagaagccgacctgtgcgtcgatcatggggctgcaggcagcgcgccag
ttggcgctggatctgttgcgcgacgccggggaggccatccccccgctgggaacgcgtgcg
gaacggttggcgcagatgctgcaacgggccaacgcgtatctgttcaagcacgcgccatgc
gcatga
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