Aminobacter sp. Y103A: Amn_18520
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Entry
Amn_18520 CDS
T09420
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amis
Aminobacter sp. Y103A
Pathway
amis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Amn_18520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_18520
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Amn_18520
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Amn_18520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BBD36972
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Position
1959151..1959927
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AA seq
258 aa
AA seq
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MEWRDEGIILGTRRHGETSAVLEVMTRAHGRHLGLVRGGRSRKQQPVLQAGNRVELIWRA
RLDEHLGTFQAEPIELNAARLIDSAVAVYALQTLAAHLRLLPERDPHAGLYETLAILIEH
LNDADAVGELVVRFELLVLDELGFGLDLTECAATGALEELSYVSPKSGRAVSRAAGEPWR
DKLLPLPHFLQRGARQGADLKSIEDAFRLSSFFFARHVYEPRGIEPPDARGGLLTALRKF
HAARAISPGAISHGDTAA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcgacgaaggaatcatcctcggcacccgcaggcatggcgaaacctctgcc
gtgctggaggtgatgacgcgcgcccatggccggcatctcggcctggtgcgcggcggccgc
tcgcgcaagcagcagccggtgctgcaggccggcaaccgcgtcgagctgatctggcgcgcc
cgcctcgacgaacatctcggcaccttccaggccgagccgatcgagctcaacgcagccagg
ctgatcgacagcgcggttgccgtctatgcgctgcagacactcgccgcccatctccggctg
ctgcccgagcgcgacccgcatgccggcctctacgagacgctggcgatcctgatcgaacat
ctgaacgatgccgacgccgtcggcgaactcgtggtgcgcttcgagctgctggtgctggac
gagctcggcttcggcctcgatctcaccgaatgcgccgccaccggcgcgctcgaggagctg
agctatgtctcgccgaagtcgggccgcgccgtgtcgcgcgccgccggcgagccatggcgc
gacaagctgctgccgctgccacatttcctgcagcgcggggcgcggcagggcgccgacctc
aagtccatcgaggatgccttccggctgtcgagcttcttctttgcccgccatgtctacgag
ccgcgcggcatcgagccgccggatgcgcgcggcgggcttctgacggcgctgcggaaattc
cacgccgcccgagccatctcgcccggcgcgatttcccatggagacactgccgcatga
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