Aminobacter sp. Y103A: Amn_20750
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Entry
Amn_20750 CDS
T09420
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amis
Aminobacter sp. Y103A
Pathway
amis03420
Nucleotide excision repair
amis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amn_20750
03430 Mismatch repair
Amn_20750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_20750
Enzymes [BR:
amis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amn_20750
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amn_20750
MMR (mismatch excision repair)
Other MMR factors
Amn_20750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBD37195
LinkDB
All DBs
Position
complement(2167647..2169725)
Genome browser
AA seq
692 aa
AA seq
DB search
MNIAIRDSAAVSGYLARLNPGQRAAVLHGDGAVSGPLLIIAGAGSGKTNTLAHRVAHLIV
RGADPRRILLMTFSRRAAAEMSRRVERIAADVLQERAASLMEGLSWAGTFHSVGARLLRD
YALDIGLEPAFTIHDREDSADLMNLVRHQLGFSETEKRFPTKATCLAIYSRVVNSQDRLE
AVLGHAFPWCVGWSDELKALFGAYVEAKQAQNILDYDDLLLYWAQMAAEPDIAAHLSQRF
DHILVDEYQDTNRLQAAILTAIKPDGRGLTVVGDDAQSIYSFRAAEVRNILDFPGLFAEP
AQVVTLDQNYRSTDAILNAANAVIGEAEERFTKNLWTERRSLEKPRIVTVADEAEQAGYV
CDEVLKEREAGTLLKEQAVLFRAAHHSGPLEVELTRRNIPFVKFGGLKFLDAAHVKDVLA
ILRFAQNPRDRIAGFRVMQLMPGVGPSAASNAIDSMEQSLDLEMGLARFSPPARAASDWP
GFVALFSDLRRGPGWPAEMERARLWYEPHLERKHEDATTRRADLLQLEQIASGYPSRERF
LTELTLDPPSATSDEAGPPHLDEDYLILSTIHSAKGQEWTKVFVLNAVDGCMPIDLSAGE
RKELEEERRLLYVAMTRAKDSLHLITPQRFFTSGQAARGDRHVYASRSRFIAQHLLTHFE
TTAWTSQSFQQDKATRPRTSVDIKGKMRSMWT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccatccgtgattcggcagcagtttccggttatctcgcccgcctgaacccg
ggccagcgtgctgccgtcttgcatggcgacggcgcggtgtcgggccccttgctgatcatt
gccggcgccggctcgggcaagaccaacacgctcgcccaccgggttgcccatctcatcgtt
cgcggcgccgacccccggcgcatcctgctgatgacattttcgcgccgtgccgcggccgag
atgagcaggcgcgtcgagcgcatcgccgccgacgtgctgcaagagcgcgcggcgagcctg
atggaagggctgagctgggccggcacgttccattccgtcggcgcgagattgctgcgcgac
tatgcgctcgacatcgggctcgagccggccttcaccatccatgaccgggaggattcggcc
gacctgatgaacctggttcgccaccagctcggcttttccgagacggagaagcgctttccc
accaaggcgacctgccttgccatctattcccgtgtcgtcaattcccaggacaggctcgag
gcggtgctcggccacgcctttccctggtgcgtcggctggagcgacgagctgaaggcgctg
ttcggcgcctatgtcgaggccaagcaggcgcagaacatcctcgattatgacgacctcctg
ctctactgggcgcagatggccgccgagcctgacatcgccgcccatctttcccagcgtttc
gaccatatcctcgtcgacgaataccaggacaccaaccggctgcaggcggcgatcctgacg
gcgatcaagcccgacggccgcggcctgacggtggtcggcgacgacgcccagtcgatctat
tcgttccgcgccgccgaagtgcgcaacatcctcgatttccccggcctgtttgccgaacct
gcccaggtggtgacgctcgaccagaactatcgctcgaccgacgccatattgaacgccgcc
aatgccgtcatcggcgaggccgaggagcgtttcaccaagaacctgtggaccgaacgccgg
tcgctggaaaagccccgcatcgtgacggttgcagacgaggccgaacaggccggctatgtc
tgcgacgaggtcttgaaggagcgcgaggccggcacgcttttgaaggaacaggcggtgctg
tttcgggcagcgcaccattcggggccgctcgaggtcgagctcaccaggcgcaacatcccc
ttcgtcaagttcggcgggctgaagtttctcgatgccgcccatgtcaaggacgtgctggcc
atcctgcgttttgcccagaacccgcgcgaccgcatcgccggcttccgggtgatgcagctg
atgccgggcgtcggcccgtcggcggcgtcgaacgccatcgacagcatggagcagtcgctc
gacctcgaaatggggctggcgcgcttctccccgccggcccgggcggcaagcgactggccc
ggttttgtcgcgctgttttcggacctccggcgcggccccggctggccggccgagatggag
cgggcgcggctgtggtacgagccgcatctcgagcgcaagcacgaggatgcgacgacacgg
cgggccgacctgctgcaactcgaacagatcgcctccggttatcccagccgcgagcgtttc
ctcaccgagctgacactcgacccgccctcggcaaccagcgacgaggccggaccgccgcat
ctcgacgaggattatctcatcctgtcgacgatccattcggccaagggccaggagtggacc
aaggtgttcgtcttgaacgcggtcgacggctgcatgccgatcgacctcagcgccggcgag
cgcaaggagctcgaggaagaacgccggctgctttatgtcgccatgacccgggccaaggat
tcgctgcacctgatcacgccgcagcgtttcttcacctccggccaggcggcgcgcggcgac
agacacgtctatgcctcacgcagccgcttcattgcgcagcatctgcttacccatttcgag
acgaccgcctggaccagccagtcgttccagcaggacaaggcgacacggccgcgcacatcg
gtcgacatcaagggcaagatgcgctcgatgtggacttag
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