Aminobacter sp. Y103A: Amn_22300
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Entry
Amn_22300 CDS
T09420
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
amis
Aminobacter sp. Y103A
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amis03009
]
Amn_22300
Enzymes [BR:
amis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Amn_22300
Ribosome biogenesis [BR:
amis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Amn_22300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBD37350
LinkDB
All DBs
Position
2318516..2320687
Genome browser
AA seq
723 aa
AA seq
DB search
MDDDRKKFPRKGGSKPAGAGGRDGGAKKFGKPRSEGGAKPFAKKPFVKRAEGAEGGERPK
RDFRPRDGEARAERPFNKGPRPEGKPYEKREGGRSFGGDKPFAKKPYRARAVEGAEGGER
PRRDFAPRDGEARAERPFHKGPRPEGKPYEKREGGRSFGGDKPYRARPAEGGERPQREFR
PRDGEARAEGGERPFRKGPRPEGKPYEKREGGRSFGGDKPYRARPAEGGDRPQREFRPRD
GDARPAGGDRPYRARPEGGKPFEKRGEGFKPRPRASEDAPEPGERIAKRLARAGLASRRD
AEELIAAGRVKVNNKVLASPAVNVMPDDIIHLDGMEIPPIERTRLFLFHKPAGVVTTNRD
PEGRKTVFDVLPQELPRLMTIGRLDINTEGLLLLTNDGGLSRVLELPATGWLRRYRVRVH
GKVEQKTLDGLRDGIAVEGVFYGSIEATLDREQGSNAWITIGLREGKNREVKNILGALGL
EVNRLIRISYGPFQLGELPEGHVQEIKGKMLRDQLGERLIEESGANFDADIVKPFSNKPT
FRREERREEEAPRAPRAPRLDIGEGGLIKNRKRDRERHREDVLGRLSTERPAGFGDKPSF
GDKPRFGDKPRSGDRPKFGDKPKFGDKPRFGDKPKFGGKKGDEREKKPFETPGARKTNVW
MAPGARPQSEKAKADAASKPRFDKSRSDKPRSDRPRSDRPHSDRPGGDGPRGGRPGGPRR
DRG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatcgtaagaaattcccccgcaagggcgggtcaaaaccggctggagcgggc
ggccgtgacggcggtgccaagaaattcggcaagccgcgcagcgaaggtggcgcaaaaccc
tttgccaagaagccgttcgtgaagcgcgccgaaggtgccgagggcggcgaacgcccgaag
cgcgatttccgcccgcgcgacggcgaggcgcgcgccgagcggccgttcaacaaggggccg
cgccccgaaggcaagccgtatgaaaagcgcgaaggcggccgctcgttcggcggcgacaag
ccctttgccaagaagccctatcgtgcgcgcgccgtcgaaggtgccgaaggcggcgaacgc
cccaggcgcgatttcgcgccgcgtgatggcgaagcccgcgccgagcgtccgttccacaag
ggcccgcgccctgaaggcaagccatatgaaaagcgcgaaggcggtcgttcctttggcggc
gacaagccgtaccgtgcgcgcccggccgagggtggggagcgtccgcagcgtgaattccgt
ccgcgcgacggcgaggcgcgcgctgaaggcggcgagcgtccgttccgcaagggcccgcgc
cccgagggcaagccatatgaaaagcgtgaaggcggccgttcgtttggcggtgacaagcct
tatcgtgcccgtcctgccgaaggcggcgatcgtccgcagcgcgagttccgtccgcgcgac
ggtgatgcgcgcccggcaggcggcgatcgcccgtaccgcgcgcgccccgagggcggcaag
cccttcgagaagcgcggcgaaggcttcaagccgcgcccgcgtgcttccgaggatgcaccg
gagccgggcgagcgcatcgccaagcgcctggcgcgtgcgggcctcgcctcgcgccgcgat
gccgaggagctgattgctgccggccgcgtcaaggtcaacaacaaggtgctggcgtctccg
gcggtcaacgtcatgcctgacgacatcatccatctcgacggcatggaaatcccgccgatc
gagcgcacccgcctgttcctgttccacaagccggccggcgtggtcaccaccaaccgcgat
cccgagggccgcaagaccgtcttcgacgtgctgccgcaagagctgccgcgcctgatgacg
atcggccgcctcgacatcaacaccgaaggcctgttgttgctgaccaatgatggcggcctg
tcgcgcgtgctcgaactgccggcgaccggctggctgcgccgctaccgcgtgcgcgtccac
ggcaaggtcgagcagaagacgctggacggtctcagggacggcatcgccgtcgagggcgtg
ttctacggctcgatcgaggcgacgctcgaccgcgagcagggcagcaatgcctggatcacc
atcggcctgcgcgaaggcaagaaccgcgaggtcaagaacatcctcggcgcgctcggcctc
gaggtgaaccgcctgatccgcatctcctatggcccgttccagctcggcgagctgccggag
ggccatgtccaggagatcaagggcaagatgctgcgcgaccagctcggcgagcggctgatc
gaggagtcgggggccaattttgacgccgacatcgtcaagccgttctccaacaagccgacc
ttccgccgcgaggaacgtcgcgaggaagaggcgccgcgcgccccgcgtgcgccccgcctc
gacatcggcgaaggcggcctgatcaagaaccgcaagcgcgatcgcgagcgtcatcgcgag
gacgtgctgggccgcctgtcgaccgaacgccctgccggcttcggcgacaagccgagtttc
ggtgacaagccaaggttcggcgacaagccgagatccggggaccggccgaaattcggggac
aagcccaagttcggcgacaagcccaggtttggcgacaagccgaaattcggcggcaagaag
ggtgacgagcgcgaaaagaagccgttcgagacgcctggtgcgcgcaagacaaatgtctgg
atggctccgggcgcgcgtccgcagagcgaaaaggccaaggccgatgccgcgtcgaagccg
cgcttcgacaagtcgcgttccgacaagcctcgttccgacaggcctcgttccgacaggccc
cattctgacagaccgggcggcgacggcccgcgcggtggacggcccggcggtccgcgccgg
gatcgcggctga
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