Aminobacter sp. Y103A: Amn_29950
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Entry
Amn_29950 CDS
T09420
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amis
Aminobacter sp. Y103A
Pathway
amis03030
DNA replication
amis03430
Mismatch repair
amis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amn_29950
03430 Mismatch repair
Amn_29950
03440 Homologous recombination
Amn_29950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amis03032
]
Amn_29950
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_29950
Enzymes [BR:
amis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amn_29950
DNA replication proteins [BR:
amis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amn_29950
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amn_29950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
Motif
Other DBs
NCBI-ProteinID:
BBD38115
LinkDB
All DBs
Position
complement(3111880..3115425)
Genome browser
AA seq
1181 aa
AA seq
DB search
MADDSMSSDRLPRDPLKREALIRAEKPETSDRMFIHLRVHSAYSLLEGALKLDKVVGHAA
KDEAPAIAVADTNNLFGALEFAQKATKDGVQPLIACQVDVDFADGGDSTQRGQGWKQALD
LFPVVLIAATETGYANLVRLVSRLYLETPNGEPVHAKLDWLATAADGIICLTGGPRGPVG
AAIKSDHTAIAESRLLTLKQMFGDRLYVELERLAGYDRMIEAATIELAYRHYLPLVATNE
AFFAKRADFEAHDALIAIAEGSVVAEDNRRRLTPDNFLKSQKEMAELFADLPEAIDNTVE
IARRCSYYPKNRNPILPRFTGGDIADADAAVAAEAAELSRQAREGLAMRLETRGLSTGYT
PEQYQERLEYELGIIERMKFPGYFLIVADFIKWGKQQGIPVGPGRGSGAGSLVAYALTIT
DVDPLRFSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVVGKYGRDQVGQIITFGTLQ
ARAVLRDVGRVLQMPYGQVDKLTKMVPQNPANPVTLAQAIEGEPRFAEEAEREPIVQTLL
DMAQKLEGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFD
FLGLKTLTVLQKAVHFISRKGVDIDLALIPLDDPLTYAMLSRGETVGIFQVESAGMRKAL
IGMKPDQVEDIIALVALYRPGPMENIPTYNARKHGDEEIASIHPMIDYLVKETQGVIVYQ
EQVMQIAQVLSGYSLGEADLLRRAMGKKIRAEMDKQRERFVTGAMDKKVSKPQANAIFDL
LAKFADYGFNKSHAAAYAIVSYQTAYLKAHYPVEFLAASMTYDMSNTDKLNDFRQDAMRL
GIDVVPPSVMTSFRDFEVGEKKIFYSLAAIKGVGEAAVHHIVAKRQEKPFASLADFCERI
DPKLVGKRVFESLIMAGALDCFGHERAAMMAGIERMMGLASRAHENATLGQSDIFGSAAS
GQAPSLHLPVADAWLAADRLHREFQVVGFYLSAHPLDEYKAALEKMRVQNWADFAAAVKR
GATAGRLAGTVTTKQERKTKTGNKMGIVQFSDVSGQYEAVMFSETLAQYRDLCEPGKSVV
VTVAAEDRPEGVNLRIQTVQSLEDEASRVQKTLRIFVRDAAPLNMLSNQLTVRGEGEVSF
IVLKGEAEGEIEIELRERYRITPSIASAMRAVPGVVEVELV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattcgatgtcgagtgacaggctcccacgcgatcccctgaagcgtgaagcg
ctcataagggcagaaaaaccagagacttccgaccggatgttcattcatctgcgcgttcac
tctgcctattcgctgctcgaaggtgccctgaagctcgacaaggtcgtcggacacgctgcc
aaggacgaggcgcccgccatcgcggttgccgacaccaacaacctgttcggcgcgctggag
tttgcccagaaggccaccaaggatggtgtgcagccattgatcgcttgccaggtcgacgtt
gactttgcagacggtggcgacagcacccaacgcggccagggctggaagcaggcactcgat
ctgtttccggtggttctgattgccgcgaccgagaccggctacgccaaccttgtcaggctg
gtcagccggctctatctcgaaaccccgaacggcgaaccggtgcacgccaagctcgattgg
ctcgccaccgcagcggacggtattatctgcctgaccggtggcccacgcgggccggtcggt
gccgcgatcaagagcgaccatacggcaattgccgaaagccgcctgctcaccctgaagcag
atgttcggcgatcggctttacgtcgaactcgagcgtctggccggctatgaccgcatgatc
gaggcggcaacgatcgaactcgcctatcgccactatctgccgctggtcgccaccaatgag
gcgttcttcgccaagcgtgccgacttcgaggcccatgacgcgctcattgccatcgccgag
ggttcggtcgtcgccgaggacaatcgccgcaggctgacgccggacaatttcctcaagtcg
cagaaggagatggcagagctttttgccgatctgcctgaggcgatcgacaacaccgtcgag
atcgccaggcgctgttcctactatcccaagaaccgcaatccgatcctgccgcgattcacc
ggtggcgacatcgccgatgctgacgcggcggttgccgccgaagcggcggaactgtcccgc
caggctcgcgaaggtcttgcgatgcgcctggaaacgcgtggcctgtcgaccggctacacg
cccgaacagtaccaggaacggctcgaatatgagcttggcatcatcgagcgaatgaaattc
ccgggctacttcctgatcgttgccgacttcatcaaatggggcaagcaacagggcatcccg
gtcggccccggccgtggttcaggtgcaggctcgctggttgcctatgcgctgaccatcacc
gatgtcgatccgctgcgtttctcgctgctgttcgagcgcttcctcaaccccgaccgcgtc
tcgatgcccgacttcgacatcgacttctgccaggaccgccgcgaagaggtgatccgttat
gtggtcggcaagtatggtcgcgaccaggtcggtcagatcatcaccttcggtacgctgcag
gcgcgcgccgtgctgcgcgacgttggccgcgttctgcagatgccttatggccaggtcgac
aagctcaccaagatggtgccgcagaacccggccaatccggtgacgctggcccaggcgatc
gagggcgagccgcgctttgccgaggaggcagaacgcgagccgatcgtgcagacgctgctc
gacatggcacagaagctcgagggcctctaccgccacgcctcgacgcacgccgccggcatt
gtcatcggtgaccgcccgttgtccgaactggtgccgatgtatcgagacccgcgctcggac
atgccggtcacccagttcaacatgaaatatgtcgagcaggccggactggtgaagttcgac
ttcctcggcctgaagacgctgacggtgctgcaaaaggcggtgcatttcatcagccgcaag
ggcgtcgacatcgacctcgcgctgatcccgctcgacgatccgctgacctacgccatgctg
tcgcgcggcgagaccgtcggcatctttcaggttgaaagtgccggcatgcgcaaggcgctg
atcggcatgaagcccgaccaggtcgaggacatcatcgcgctggtggcactctaccgcccc
ggcccgatggagaacatcccgacctacaacgcccgcaagcatggtgacgaggagatcgcc
tcgatccatccgatgatcgactatctggtgaaggagacgcaaggcgtcatcgtttaccag
gagcaggtcatgcagatcgcgcaggtgctgtcgggctattcgctcggcgaagccgatctg
ctgcgccgcgccatgggcaagaagatccgcgccgagatggacaagcagcgcgagcgcttc
gtcaccggtgccatggacaagaaggtcagcaaaccgcaggccaacgccatcttcgacctg
ctcgccaagtttgccgactacggcttcaataagtcgcacgccgcagcctacgccatcgtc
tcctaccagacggcgtatctgaaagcacactatccggtcgagttcctcgcggcctcgatg
acctacgatatgtccaacacggacaagctgaacgacttccgccaggatgcgatgcggctc
ggcatcgacgtcgtgccgccatcggttatgaccagcttccgcgacttcgaggtcggcgag
aagaagatcttctactcgctcgccgcgatcaaaggcgtgggtgaggcggcggtgcaccac
attgttgccaagcgccaggaaaagcccttcgccagcctcgccgacttctgcgagcgcatc
gaccccaagctggtcggcaagcgtgtctttgaaagcctgatcatggccggcgcgctcgac
tgtttcggccacgagcgcgcggcgatgatggcgggcatcgagcgcatgatgggccttgcc
tcccgcgcccacgaaaatgccacccttggccagtccgacatcttcggcagtgctgcctca
gggcaggcgccgtcgctgcacctgccggtcgccgatgcctggcttgccgccgatcgcctg
catcgcgaattccaggtcgtcggcttctacctctcggcgcatccgctcgacgaatacaag
gccgcacttgagaagatgcgcgtccagaactgggccgactttgccgctgccgtgaagcgt
ggtgcgaccgcagggcgtctggccggtaccgtcaccaccaagcaggaacgcaagaccaag
accggcaacaagatgggcatcgtccagttctcggatgtctcgggccagtatgaagcggtg
atgttctcggagacgctggcgcagtatcgcgacctgtgtgaacccggcaaatcggtggtc
gtcaccgttgccgccgaggatcgccccgaaggcgtcaacctgcgcatccagactgtgcag
tcgctcgaggacgaagcgagccgggtgcagaagacgctgcgcatcttcgtgcgcgacgcg
gctccgctcaacatgctgtccaaccagctgacggtgcgcggcgaaggcgaggtaagcttc
atcgtgctcaagggcgaggccgagggcgagatcgaaatcgagctacgcgaacgctaccgc
atcacgccgtcgatcgcttcggcgatgcgcgccgtgccgggagttgtcgaggtcgagctg
gtctag
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