KEGG   Aminobacter sp. Y103A: Amn_32230
Entry
Amn_32230         CDS       T09420                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
amis  Aminobacter sp. Y103A
Pathway
amis03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Amn_32230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amis03019]
    Amn_32230
   03110 Chaperones and folding catalysts [BR:amis03110]
    Amn_32230
   03029 Mitochondrial biogenesis [BR:amis03029]
    Amn_32230
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amis04147]
    Amn_32230
Enzymes [BR:amis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Amn_32230
Messenger RNA biogenesis [BR:amis03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Amn_32230
Chaperones and folding catalysts [BR:amis03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Amn_32230
Mitochondrial biogenesis [BR:amis03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Amn_32230
Exosome [BR:amis04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Amn_32230
  Exosomal proteins of other body fluids (saliva and urine)
   Amn_32230
  Exosomal proteins of breast cancer cells
   Amn_32230
  Exosomal proteins of colorectal cancer cells
   Amn_32230
  Exosomal proteins of bladder cancer cells
   Amn_32230
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BBD38343
LinkDB
Position
complement(3351728..3353350)
AA seq 540 aa
MAHKQVLFRSEAREKILRGAAQLADAVRVTLGPRSKSVLIEARWGPPIVCNDGVTIAKEF
DLRDPEENLGARMLRQAAEKTGEMVGDGTSTSTILAQAMLADGVRNVVAGASAIDIKRGL
DRAAKRAIEALKAASKPVQTRWEREQVAAISAHNDAGIGELIGAAMEKVGDDGVITVEEA
KTTETVLDVVEGMQFDRGYLSPYFATDTEKMEAVLEDALVMVVDRKIGTLNDLVKLLEAV
AKSGAPLLIVAEEVEGDALATLIVNHIRGTLKSCAVKAPGFGDRRKAMLEDIAVLTGGQL
ISEQLGIKLENVSVEQLGRARRVVCDKENTTIVGGGGKRKAIDARIEQIRREIENTTSDY
DREKLQERLAKLTGGVAVIKVGAPTESEMKSRKEALDDAISATKAAIAEGIVPGGGLALL
RCTTAVEEEEKLVDGDERTGVQILKRALETPVRQIAENSAVDGGVVVARMLEGKDNFGFD
AGRKQYVDLVEAGIIDPTKVVRIALENAVSVASTLLLTEATTTEIPEEKGVRPTDTNMSM
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggctcacaaacaagtgttgttccgttcggaggctcgcgagaagatattgcgaggcgct
gcccagctcgccgacgcggttcgagttacactcggaccgcgttcgaagtcggttctgatc
gaggcaagatggggtccgccaatagtctgcaatgatggcgttacgatcgccaaagagttc
gacctcagggatccggaggaaaatctcggagcccggatgctcaggcaggcagccgaaaaa
acgggcgagatggtgggtgacggaaccagcacttcgaccattcttgctcaagcgatgctc
gctgatggcgttcgaaacgtcgtggcaggtgccagcgccatcgatatcaagcgaggtctc
gatcgcgctgcgaaaagagcgatcgaagcattgaaggcagcttccaaaccggttcagacc
cgatgggaaagggaacaggtcgctgcgatctcggcgcacaatgatgccgggattggcgaa
ctgattggagcggccatggagaaggtcggcgatgacggtgtcatcaccgttgaagaggca
aagacgacggagacagtcctcgacgtggtcgagggcatgcagttcgaccgtggttacctt
tcaccatatttcgcgactgatacggagaagatggaggcggtccttgaggacgcgcttgta
atggtcgtggaccgcaagattggtacgctgaacgatctggttaagcttctcgaggccgtg
gccaagtccggcgcgccccttctgatcgtggccgaggaggttgagggagatgctcttgcg
acgctcatcgtcaaccacatccgcgggacactgaagagctgtgccgtcaaggcgccaggt
ttcggcgacaggcgtaaggcaatgcttgaggacatcgcagttctgacgggaggacagctc
atctcggagcagttgggtatcaagcttgaaaatgtctcggtcgagcaactcggccgtgcc
cgccgcgtcgtgtgcgacaaggaaaacacgacaatcgtaggcggcggcggaaagcgcaag
gcaattgatgccaggatcgagcagattcgccgggagatagagaataccaccagcgattat
gatcgcgaaaagctgcaggagcggctcgcaaagctcactgggggcgttgcggtaatcaag
gtgggggctcccaccgaatccgagatgaaatcacgaaaagaggccttggacgacgcaatc
agcgccaccaaggcagctatcgcagagggcatcgttcccggtggcgggcttgcactcctg
cgctgtacgacggctgtcgaggaggaagagaagctcgttgacggggacgagcgtacggga
gtgcagatcttgaaacgggcgctcgaaactccggtgcgccagatagcggagaattccgca
gtcgatggaggtgtcgtcgttgcgagaatgctggaagggaaagacaatttcggctttgac
gctggtcgcaagcagtatgtcgatctcgtcgaggcgggtatcatcgatccgaccaaggtc
gtgcgcattgcgttggaaaatgcagtttcggtagctagcacgttgctgctgaccgaagcc
acgacgacggagattcccgaagaaaagggagttcgaccgaccgacacgaacatgtcgatg
tag

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