Aminobacter sp. Y103A: Amn_pa04540
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Entry
Amn_pa04540 CDS
T09420
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amis
Aminobacter sp. Y103A
Pathway
amis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amn_pa04540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amis02000
]
Amn_pa04540
Transporters [BR:
amis02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Amn_pa04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BBD41000
LinkDB
All DBs
Position
pANY103a:complement(507456..508490)
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AA seq
344 aa
AA seq
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MKLTRREFAVGMTTAIASMTLPRLAAAQSPLVVPTYGGLWAKFWEEKLLPGLTAATGIQP
QLDVGLGKDFVAKIRAGGGRSPYSIFMGNENIAAVLRAEGFFEPFDLAKVPNAAKTFPQF
VNKDAKGIRAIVSPIGLAYRTDLVKTAPTSWHDLWDNPEFKGKTGLYQIGNTGAVLFLRL
VAELFGSGPDDFDTAFAKIKELLPFTQASWSGEVATALIRGDAIIAPVDWTEIMTLQDKG
APVAIVAPKEGVLAFEQSFNLVATGAEKDAAHAYLNYILDAKVQQDMAKAFYTSPSNSES
SVDDAMKARTPIVGPRMAEIKSYDWDSYVDKAADIADRWNREMA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactaggcgtgaattcgccgtcggtatgacgacggctattgcctcgatgacc
ctgccacggcttgccgcggcgcaatcgccactggtcgttccgacctatggcgggctatgg
gccaaattctgggaagagaagctcttgcccggcctcacggccgcaacaggcatccagccg
cagctcgacgtcgggctcggcaaggatttcgtcgccaagatccgcgccggcggcggtcgg
tcgccctacagcatcttcatgggcaacgaaaacatagccgccgtgctgcgtgccgagggc
ttcttcgagcctttcgacctcgccaaggtgccgaatgcggcaaagaccttcccgcaattc
gtcaacaaggacgccaaaggaatccgcgccatcgtctcaccgatcggactcgcttaccgc
accgacctggtgaagacggcgcctacctcctggcacgacctctgggacaatcccgagttc
aagggcaagaccgggctctaccagatcggcaacaccggtgcggtcctcttcctacgcctg
gtcgccgaattgttcggcagcggcccggacgatttcgacaccgcatttgccaagatcaag
gaactgctgcccttcacgcaggcttcatggagcggcgaggtggcaacggcactgatccgc
ggcgacgccatcatcgcgccggtcgactggaccgagatcatgacgctgcaggacaagggg
gcaccggtggccatcgtcgcccccaaggaaggggtgctcgccttcgagcagtcgttcaac
ctggtcgcgaccggggccgagaaggacgccgcgcacgcctatctgaactacatcctcgac
gccaaggtccagcaggacatggccaaggccttctacacctctccgagcaacagcgagtct
tccgtcgacgacgcgatgaaggcgcgcacgccgatcgtcggcccgcgcatggccgagatc
aagagctacgactgggacagctacgtcgacaaggcggcagacattgccgaccgctggaac
cgggagatggcgtaa
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