Aerococcus mictus: DBT49_0000475
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Entry
DBT49_0000475 CDS
T09409
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amit
Aerococcus mictus
Pathway
amit03420
Nucleotide excision repair
amit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBT49_0000475
03430 Mismatch repair
DBT49_0000475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0000475
Enzymes [BR:
amit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBT49_0000475
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBT49_0000475
MMR (mismatch excision repair)
Other MMR factors
DBT49_0000475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
WMF94562
LinkDB
All DBs
Position
104875..107331
Genome browser
AA seq
818 aa
AA seq
DB search
MTNINQLIDGLNPQQKAAVQYTEGPLLIMAGAGSGKTRVLTHRMAYLLEEKSVRPWNILA
ITFTNKAANEMKERVKNLVGEAADTMWVSTFHSMCVRILRREAEAIGLSRSFTIADPAEQ
QSLIKRIMKDHNLDTTQFKPKMILGKISDAKNNLLGPKEYRQEYTGFIENIVADLYEDYQ
AGLQAAQSLDFDDLIMLTVRLFKEQPEILSYYQQKFHYIHVDEYQDTNEAQYRLVKLLAD
YFKNICVVGDADQSIYGWRGANMENILNFEKDYPQAKVILLEQNYRSTKTILKAANEVIQ
NNVHRQAKKLWTDNQDGGKINYYRAQNEQDESHYVLDKIRQATTDKNYQYKDIAILYRTN
AQSRTMEEALVKANIPYRIVGGLKFYDRKEIKDVLAYLRLLTNPQDNLSFTRIINVPKRG
IGPGTLDKLRYFASEHGLTLLQAAQKVDYAPISGKGAKSLKKFADMMTNLQKQREFLTIT
DLTEEVLDKSGYLADLKAQKTLEATARIENIEEFLSVTRAFDERWEKEADQRQALAEITQ
TDQAGNPVEPVNIMEDSSQADQAGEVSLLSPEELDAGLGQAALLGLDPGADASDDALLAF
ITDLSLVSDLDDSESNEEEGQVNLMTLHAAKGLEFPIVFIIGMEEGIFPLSRASEDDEEL
EEERRLAYVGITRAEKELYLTNSYSRMLYGQHKSHPESRFITEIDDDLLAKEDHSPLSMG
SFSSSRPAYYNQRSRVSKSAAKAQEKRSIFAKGPSQSQGKSSEEVEWQVGDKARHKVWGV
GTVVKVTGSDNDQELDIAFKGQGIKRLLAAFAPISKED
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatattaatcaattaatcgacggtctcaatccacaacaaaaagcagcagttcaa
tatacagaaggtcccctcttaatcatggccggggcgggatcaggaaaaacccgggtcctc
acccaccgcatggcctacttattagaagaaaaatcggtccggccttggaatatcctggcc
attacctttaccaataaggctgccaatgaaatgaaagaacgggtgaaaaacctagtcggc
gaagccgcagataccatgtgggtaagtaccttccactccatgtgtgtgcggattttacgc
cgggaagcagaagctatcggtctctctcggtcttttactattgctgatccggccgaacaa
caaagtttaattaaacggatcatgaaggaccataatctcgataccacgcaattcaagccc
aagatgatcctaggcaaaatttctgacgccaagaataatctcttagggcccaaggaatac
cgccaagaatataccggttttattgagaatattgtggctgacctctatgaagactaccaa
gctggcctccaagccgcccagtccttggactttgatgatttgattatgttgacggtccgc
ttatttaaggaacaaccagagattctttcctactaccaacaaaaattccactatattcac
gtggatgaataccaagataccaatgaagcccaataccgcttggtcaaacttttagcggat
tacttcaagaatatctgtgtggtgggggacgctgaccaaagtatctacggctggcgggga
gccaatatggagaacatccttaactttgaaaaagactacccccaagccaaggtgattctc
ctcgaacaaaactaccggtccaccaagaccatcctcaaggcggccaatgaagtgattcaa
aataatgtccaccgccaagccaagaaactctggaccgataaccaggacggtggcaagatt
aactattaccgggcccaaaacgaacaagatgagagccactatgtcttggataagatccgt
caagccacgactgacaagaactaccaatacaaggacattgccattctctaccggaccaat
gcccagtcacggaccatggaagaagctctggtcaaggctaatatcccttaccggattgtc
ggcggactcaagttctatgaccgtaaggaaattaaggacgtcctggcttacttgcgtctg
ttaactaatccccaagataatctgtctttcacccggattattaatgtcccgaaacggggg
ataggaccagggaccctggataagttacgctactttgctagtgagcacggcctaaccctc
ttacaggccgctcaaaaggtagactatgcgcccatttcaggaaaaggggccaagtcgctc
aagaaatttgcggatatgatgactaacctgcaaaaacaaagagaattcctcaccatcacc
gatcttactgaagaggtcttagataagtcgggttatttagccgacctcaaggcccaaaag
accttggaagcaacggcccggattgaaaatattgaagaattcctgtctgtaactagagcc
tttgacgaacgctgggagaaggaagccgaccaacgccaagccctagcggagattacccag
actgaccaagcaggcaaccctgttgaaccggtgaacatcatggaggattctagccaagct
gaccaagcaggggaagtgtcgctcttgagccccgaagaattagatgccggacttggtcaa
gcagccttgctgggtttagatccgggtgcggatgctagtgatgatgctctcttggccttt
attaccgacctctccctagtttctgacttggatgatagtgagtccaatgaagaagaggga
caagttaacctcatgaccctccacgccgctaaggggctggagtttcccatcgtctttatc
attggtatggaagagggcatcttccctctttctcgggctagtgaagacgatgaggaatta
gaagaagagcgccgcctagcctatgtgggcattactcgggctgaaaaggagctctatctc
accaatagttactcccgcatgctctacggccaacataagagccatccagaatcgcgtttt
atcacggagattgacgatgatctcttagccaaggaagaccatagcccgctctcaatgggg
agcttctcttccagccgaccggcctactataatcaaagaagtcgggtctccaagtctgct
gccaaagcccaagaaaaacgttctatctttgctaagggacccagccagtctcaaggcaag
agtagtgaagaagtagaatggcaggtgggtgataaggcccgccataaggtttggggcgtg
ggtactgtggtcaaggtgaccggcagtgacaatgaccaagaattagatatcgcctttaag
gggcaggggattaagcgcttgttagcggcctttgcacccattagtaaagaagattag
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