Aerococcus mictus: DBT49_0002650
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Entry
DBT49_0002650 CDS
T09409
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
amit
Aerococcus mictus
Pathway
amit03030
DNA replication
amit03430
Mismatch repair
amit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBT49_0002650 (holA)
03430 Mismatch repair
DBT49_0002650 (holA)
03440 Homologous recombination
DBT49_0002650 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amit03032
]
DBT49_0002650 (holA)
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0002650 (holA)
Enzymes [BR:
amit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBT49_0002650 (holA)
DNA replication proteins [BR:
amit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBT49_0002650 (holA)
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBT49_0002650 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
GPG1
Motif
Other DBs
NCBI-ProteinID:
WMF94978
LinkDB
All DBs
Position
555416..556435
Genome browser
AA seq
339 aa
AA seq
DB search
MTFQSTIQKIKAGQVDPIYLLLGEEKFLIQEFENQLSRAVIGDQEAVSDFNFVRLDLEEH
SLEEALVEANTISFFSEPKIIWLTQPVFLSTEKGKKEENTQALLDYMAEPAPDVTLVFVC
DFEKLDGRKKVVKQLKKAANLVDVSLADESTTTNYIKDYVRNAGYLMDRSVLQLFLERTN
YQLSNAMNELEKLFLFVGQEDRISRHDVETVVSPSLDNNIFHLTDYVMAHRLEAALDLYR
TLIQEKHQPIAILALLEANFRLFSQIALLSRTGYDQGAIAKSLGAHPYRVKMSMKQMRSY
DGQQLLAAYQDLVELDYEIKSGQVDPNLGIEWFILRFAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcaaagcaccatacagaaaataaaagcaggacaagtggatcccatctacctt
ttactaggggaggagaagtttttgatccaagaatttgaaaatcagttaagccgggcggtc
attggggaccaggaagcggtcagtgatttcaactttgtccgcttagacttagaagaacat
tccttagaagaggccttagtcgaggccaataccatttcctttttttctgagcccaagatt
atttggctgactcagccggtctttttaagtacagagaaggggaagaaggaggaaaatacc
caagccctgctggattatatggctgaaccggctcctgacgtgaccctggtctttgtctgt
gattttgagaaactcgacggccgcaagaaggtcgttaagcagttaaaaaaagccgccaat
ctggttgatgtctccttggcagacgagtcgactacgactaactacatcaaggactatgtc
agaaatgcgggctatttgatggatcgctcagtcttacagctctttttggaaagaaccaac
tatcaattatccaatgccatgaatgaattggagaagctctttctctttgtgggtcaggaa
gatcgtatcagcaggcacgatgtcgagaccgtggtgtcgccttccttggataataatatc
ttccatttgaccgactatgtcatggcccaccgcctggaagcggccttggacttgtaccgg
accctaatccaggaaaaacaccaacccattgcgattttggccctcttagaggctaacttc
cgtctttttagccagattgcgctcctatcccgcacgggttatgaccaaggggctattgcc
aagagcctaggggcccatccttaccgggtcaagatgagtatgaaacaaatgcgctcttac
gacggccagcaattattggcggcctaccaggacttggtggagttggattatgagattaag
tcaggccaggtagaccctaacttaggcattgaatggtttatcttacgttttgcggcttag
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