Aerococcus mictus: DBT49_0002675
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Entry
DBT49_0002675 CDS
T09409
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amit
Aerococcus mictus
Pathway
amit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBT49_0002675 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amit03019
]
DBT49_0002675 (pnp)
03016 Transfer RNA biogenesis [BR:
amit03016
]
DBT49_0002675 (pnp)
Enzymes [BR:
amit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DBT49_0002675 (pnp)
Messenger RNA biogenesis [BR:
amit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DBT49_0002675 (pnp)
Transfer RNA biogenesis [BR:
amit03016
]
Prokaryotic type
tRNA degradation factors
DBT49_0002675 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
CvfB_2nd
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
PCB_OB
KH_NusA_2nd
KH_KhpA-B
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
WMF94982
LinkDB
All DBs
Position
560684..562804
Genome browser
AA seq
706 aa
AA seq
DB search
MSEKQVFKMNWAGRPLQIEVGQLAKQANAAALVRYGDTVVLTAVVGAKEAKEGQDFFPLT
VNYEEKQYAAGKIPGGFIKREGRPTEHATLTARLIDRPIRPMFPEGFKNEVQVINTVMSV
DNDCSPEMAAMLGSSVALTISDIPFDGPIAGVNVGRVDGNLVINPTLDQQAQSDLELTVA
GTQTAINMVESSAQELSEEEMLEALMFGHANIKELCYFQEEIRQAVGQEKMPFEAEAFAP
ETEAEVYTRYHQKMVDAIQIFDKLEREEGVQAVKDEMIEFYDSQFLDDEDFVAKHNQIVA
LADKLEYDEVRRLITEDKVRPDGRKIDEIRPLSSEVGLLPRVHGSGLFTRGQTQVLSACT
LAPLSEYQPLDGISPETERHFIHHYNFPQYSVGSTGRYGSPGRREIGHGELGHRALQRVI
PSQEEFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLIMDQEDN
NKYTILTDIQGLEDHLGDMDFKVAGTRQGITALQMDIKIKGITEDILRESLAQAKVARMQ
LLDHLQGTLDAPRDHLSPYAPKIKMIQIKPEKIGEVIGKGGETIDKIIEATGVKIDIDDD
GQVSISSSDEAMIDKAIEIIEELTLEIEVGQVFTGTVTRIEKFGAFVQLTPKQNGMVHIS
ELQHKRTNKVEDVVQIGDQVKVKVIEVDNRGRINLSMKALTDKDAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagtatttaaaatgaattgggcgggccgtccgctccaaatcgaagtt
ggccaactggctaaacaggctaatgctgcggccctggtacgctacggggatactgtcgtc
ttaactgctgttgttggggctaaggaagccaaagaaggccaagatttcttccctcttaca
gtgaattatgaagaaaaacaatatgctgctggtaaaattccaggcggcttcattaaaaga
gagggccggccaactgaacatgccactttaactgcccgtttgattgaccgtccaatccgg
ccaatgttcccagaaggtttcaaaaatgaagtccaagtgattaacaccgtcatgtccgta
gataacgactgtagcccagagatggctgccatgttaggttcttccgtggccttaaccatt
tcggatattccttttgatggtccgattgcgggagtcaatgttggtcgcgtcgatggtaac
ttagtgattaacccaaccctagaccaacaagcccaatctgacttggaattgactgttgct
gggactcaaactgctattaatatggtggaatcctctgcccaagaattaagtgaagaagaa
atgttagaagctttgatgtttggtcatgcgaacattaaggaactttgctacttccaagaa
gagatccgccaagcagttggccaagaaaaaatgccttttgaagcggaagcttttgctcca
gaaactgaagcggaagtctatacccgctaccatcaaaaaatggtagacgctatccaaatc
tttgacaagttggaacgtgaagagggcgttcaagcggttaaggacgaaatgattgagttt
tacgatagccaattcttagatgacgaagactttgtcgctaaacataatcaaattgtggcc
ctagctgataagttagaatatgacgaagttcgccgcctgattaccgaagacaaggtccgt
cctgatgggcgtaaaattgacgaaatccgtcctctctcttcagaagtagggctcttgcca
cgggttcatgggtccggtttatttacccggggacaaacccaagtcctctccgcatgtacc
ctagctcctctatctgaataccaacccttggatggaattagtcctgaaaccgaacggcac
ttcatccaccactataacttccctcaatattcagtgggttccactggacgttacggttca
ccaggccgtcgggaaattggtcacggggaattaggtcatcgggccttacaaagagtcatt
ccttcccaagaggagttcccttataccattcgtttagtagctgaagtcttagaatctaat
gggtcttcttcccaagcttctatttgtgcagggaccctggccttgatggatgctggtgtg
ccgatcaaagcacctgtagcggggatcgccatgggcttgattatggaccaagaagataac
aataaatatactattctaaccgatatccaaggtcttgaagaccacttaggtgatatggac
tttaaggtggccggaactagacaagggattaccgccttgcaaatggatattaagatcaaa
gggattactgaagatatcctccgtgaatccctagcccaagctaaagttgcccgcatgcaa
ctgcttgaccacctccaaggtaccttggatgcgccacgtgaccatctcagcccttatgca
ccgaagattaagatgattcaaattaaacctgaaaagatcggtgaagtcatcggtaagggt
ggtgaaaccatcgataagattatcgaagctaccggagtcaagattgatatcgatgatgat
ggccaagtaagtatttcttcgagtgatgaggccatgattgataaggccattgaaatcatt
gaagaactcaccttggaaattgaagtcggccaagtctttactgggaccgttactcgaatt
gagaaatttggcgcctttgtccaattaacccctaaacaaaacgggatggttcacatttct
gaactccaacataaacgcaccaataaggttgaagatgtggtccaaattggtgaccaagtc
aaagttaaagtcattgaagtcgataaccgcggtcggatcaacctctccatgaaggctttg
accgacaaagacgctgaataa
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