Aerococcus mictus: DBT49_0002990
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Entry
DBT49_0002990 CDS
T09409
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
amit
Aerococcus mictus
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amit03019
]
DBT49_0002990
03009 Ribosome biogenesis [BR:
amit03009
]
DBT49_0002990
Enzymes [BR:
amit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DBT49_0002990
Messenger RNA biogenesis [BR:
amit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBT49_0002990
Ribosome biogenesis [BR:
amit03009
]
Prokaryotic type
rRNA helicases
DBT49_0002990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Cas3-like_C_2
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMF95043
LinkDB
All DBs
Position
637286..638635
Genome browser
AA seq
449 aa
AA seq
DB search
MSFKEYHFQPFIEAALEKLAFKEPTPIQKKVIPVIQAGKSLVAQSQTGSGKSHAFLLPLI
DQLKPANYTQLVITAPSRELADQLYQTAQQLVGDSDFDFHIERAYGGTDTKRQKERLENQ
DPQVVIGTPGRLLDLVTEGSINVHKVEHFVVDEADMTLDMGFLHTVDQIASRMPDDLKIY
VFSATIPEKLRPFLRKYLEHPEWIQVANEKLISPTITNILLPLRGRSKDDLLKQVLTMGE
PYLVLIFANTIEEVDQLYLKLKQWGLSVAKLHGDLDSRERRRVMRQIQHLDYQYVVATDL
AARGIDIEGVSHVVNYDIPKELEFFIHRVGRTGRQGMKGIALTFYHPDQENAIRWLEDRG
IHFEIKDIKNGQWVAVKDHKERQLRKDRHQEETDHVIRGMINRNKKRKVKPGYKKKLDRQ
IKSYKRDKYNKKQRQVARQKRKQNKENNR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagaataccatttccagccttttattgaggcagccctagagaaattagcc
tttaaagaacctaccccgattcaaaagaaagttattcccgttattcaagctggaaaaagc
ctagttgcccaaagtcaaaccggatcaggcaagtcccatgctttcttgctccccttaatc
gaccaattaaaaccggctaattatacccaattagtcatcacggcaccgagccgggaatta
gccgaccagttataccaaaccgcccaacagcttgttggtgatagtgactttgattttcat
attgaaagagcctatggggggaccgacaccaagcggcaaaaagaacgtttagaaaatcaa
gacccacaagtggtgattggaactccgggtcgcttattagacttagtgactgaagggtcg
atcaatgtccataaagtagaacactttgtggtggatgaggcggatatgactttggatatg
ggcttcttgcatacggttgaccaaatcgccagtcggatgcccgatgatttgaagatttac
gtcttctctgctacaatcccagagaaattacgtcccttccttagaaagtatttggaacat
ccagaatggatccaagtggccaacgaaaagctgatctccccaaccattaccaatatctta
ctccccttaagagggcggtccaaagatgacctgctcaagcaagtcttaaccatgggcgaa
ccctatttggtccttatttttgcaaatactattgaggaagtggaccaactttatttaaaa
ctcaagcaatgggggctatcggtagctaagttgcacggcgacctcgacagtcgtgaacgg
cggcgggtgatgcgtcaaatccaacacctcgattatcaatatgtggtggctacggatcta
gctgcccgcgggattgacattgaaggggtctcccatgtggtcaactatgatattcctaag
gagttagaattctttatccaccgggtaggccgtacagggcggcaaggaatgaagggcatt
gccttaaccttctaccatcctgaccaagaaaatgcgattcgctggttagaagatcgtggg
atccactttgagattaaagacattaaaaacggtcaatgggtcgcagtcaaagaccataag
gaacggcaattaagaaaagaccgccaccaagaggaaacggaccatgtcattaggggaatg
ataaaccgcaataagaaaagaaaagttaaacccggctataagaaaaaacttgaccgccaa
attaagtcttataaacgggacaaatataataaaaaacaaagacaagttgctcggcaaaaa
cgcaagcaaaataaagaaaacaaccgttaa
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