Aerococcus mictus: DBT49_0003925
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Entry
DBT49_0003925 CDS
T09409
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amit
Aerococcus mictus
Pathway
amit03030
DNA replication
amit03430
Mismatch repair
amit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBT49_0003925
03430 Mismatch repair
DBT49_0003925
03440 Homologous recombination
DBT49_0003925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amit03032
]
DBT49_0003925
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0003925
Enzymes [BR:
amit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBT49_0003925
DNA replication proteins [BR:
amit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBT49_0003925
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBT49_0003925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MamS_MamX
RecG_wedge
Deam_C
SSB
Motif
Other DBs
NCBI-ProteinID:
WMF95222
LinkDB
All DBs
Position
856129..859503
Genome browser
AA seq
1124 aa
AA seq
DB search
MFTPLNVNTSYTLLKSPMPVKDYVEAAKALDYQNLAISDVNVMYGVIDFYNYCKHYDINP
LIGMTVSIQRPDQRDQEEWLIYAKNDQGYRSLMRLSSLIKSQEPIDYQAVRDFIFNNHRN
WITILEANNGPHMRFLKQQREEEAAAFLDKLREIFKASDLYMGVDESYLYHQEALEDLAK
KSQIPLIAQSKLAYLSKNDVFTQEVLAAIEVNQPLDNYREKAGAEGQFFLRSLASYQESY
QNKGLAKAFDQVSEAFDGVHLDIQFDQALLPKYPIESGQSSKEFLKDLAYQGLSKRVGNK
QSYRERLDYELSIIDQMGFNDYFLIVWDVMDYAHKKHIMTGPGRGSAAGSLVAYCLFITD
VDPIRNHLLFERFLNPERQSMPDIDLDFPDDKRQDILNYVYHKYGSDHVAQISTFGTFAA
RKAIRDVGNAFNKSQATMSRWANTISSQNQTLEEAYQSSSQLQQYIAAEEDGQLWFQTAK
KIEGLPRHVSTHAAGVILSDQDLTDFIPLQAALNHSIHQSQYTMHEIERIGLLKIDFLSL
SNLTILANSVRAAEKISKSRLRPIDFPRNDQLVYRVFSQANTLGVFQFESNGIRRVLRRV
KPSSMADLAAVNALYRPGPMQQINHFVNRKHGKEPITYPHPDLEGILKETYGIIVYQEQV
MQVAQKIAGFSLGEADILRRTISKKDKATMDRLQAKFIRQAVAKGYSQSVAQKIYAYIEA
FADYGFNKSHAYAYSYLAYEMAWLKVHYPAAFYYGNLLQHKIYETKGQQLTYEASLCQVK
LQLPDVNRSYTTMQVVDDQHILLGLTDIRGLMRNFTTAIVQERLNGGQYRSLGDFIQRLP
KNYLKADNLEKLALAGALDSFGYNRRTLIEEALPKLLEAVNLFGGSNNQQLSLFNQENRE
LYAPEIKQLNEYDDRLLLEGEQETLGQSISVELYSDYRPYYQNGQIQPINKLSDKSQVTI
IGEIVKVKRIQTKKNQPMAFLTLRDEHSEVEVIAFPKAYIDFAAYIREGQQVLVQGKTQT
RKQGLQVVLDQCQPLNHQLLTELERKRLNSIQTINIRVASSQVASEKKADLLALINKYHG
RVKLTFTMAKEQKKYQLGERFAVQARPEVIQELRKIYGSENVLY
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacacccttaaatgtgaatacatcctatacgcttttaaagagtcccatgccggta
aaggattatgtcgaagcggccaaagccttagactatcaaaacttagcgataagtgatgtc
aatgtgatgtatggggtaattgatttttataattattgcaagcattatgacatcaatccc
ttaattggaatgaccgtttcaattcaacgtcctgaccagcgtgaccaagaggagtggctg
atttatgctaaaaatgatcaaggctaccgctctcttatgcgcttaagttccttaattaaa
agccaagagcccattgattatcaggcggttagagactttatctttaacaaccaccgcaat
tggatcactattttagaagctaataatggcccacatatgcgttttctcaagcaacagcgt
gaagaagaggccgctgccttcttagataaattacgggaaatcttcaaggcttctgactta
tatatgggggttgatgaatcttatctctaccatcaagaagccttggaagacttggctaag
aaaagtcagattcccttgatcgcccagtcaaagttggcttatttgtcaaaaaatgatgtc
tttacccaggaagtattagctgctattgaagtcaatcagcccctagataattatcgagaa
aaagcaggggcagaagggcagttttttctaaggagtctagcgtcttatcaagaatcctac
caaaacaagggactagctaaggcttttgaccaagtgtcagaggcttttgatggggttcat
ttagacattcagtttgaccaagcgcttttgcccaagtatcccattgaatcagggcaaagt
agtaaggaatttctcaaagatttagcctatcaaggtctgtctaagcgggtgggtaataag
caaagctaccgagagcgcttggattacgaactttccattattgatcaaatgggcttcaat
gattattttctcattgtttgggacgtgatggattatgctcataagaagcatattatgacc
ggaccaggtcgaggatctgctgcgggttccttggtagcttattgtctttttattaccgat
gtagaccctataagaaatcatttactttttgagcgttttcttaatcctgaacgccagtcg
atgccggatattgatttggactttcctgatgataagcgccaggatattttgaattatgtc
tatcacaaatatggtagtgaccacgtggctcaaatttctacctttggcacctttgctgcc
cggaaggccatcagggacgtcggtaatgcttttaataagagtcaagcgaccatgagccgt
tgggccaataccattagctcgcaaaatcagactcttgaagaagcttatcaaagttccagc
caactccaacaatatatagcagcagaggaggatggccagctctggtttcagaccgctaaa
aagattgaaggcttgcctcgccacgtctctacccatgcggcaggggttattctcagtgac
caagatttgaccgattttatccccttacaggctgcccttaaccattccattcaccagtcc
caatacaccatgcatgaaattgagcggattggtttattaaaaattgactttttgagttta
agtaacttaacgattttagccaatagtgtcagagcagcagaaaaaatcagcaaaagtcgc
ttacgtcctatagactttcctcgtaatgatcaattggtctatcgtgtctttagtcaagcc
aataccttgggtgtctttcaatttgaatctaatgggattcgccgtgtcttgaggcgagtg
aagccaagttcaatggcggaccttgcggcagtaaatgctctctaccggccagggcccatg
caacaaattaatcactttgtcaatcgtaaacatggtaaggagccgattacttacccccat
ccggacttagaaggtatcttgaaggaaacttatggcattattgtctaccaggaacaagtc
atgcaagttgcccaaaaaattgctggattttctttgggagaagctgatatcttacgacgg
acgatcagtaagaaagataaggcaaccatggaccgcttacaggcgaaatttattcgccaa
gctgttgctaagggctacagccaaagcgttgcccaaaaaatttatgcctacattgaagct
tttgctgattatggctttaacaagtcacatgcttatgcttattcctatttagcttatgag
atggcctggctaaaggttcactatccggccgccttttactatggaaatctcttgcaacat
aagatttatgagactaagggtcagcaattaacttatgaggctagtctttgccaagttaag
ctccaactccccgatgtcaaccggtcatatacaaccatgcaggtagttgatgaccagcat
attttactcggtcttactgatattcgtggcttgatgcgaaactttaccacagccattgtc
caggaacggctcaatggggggcagtatcggtcattgggagactttattcaacgcctgcca
aaaaactatttaaaggctgacaatctggaaaaattggcgcttgcgggagctttggacagc
tttggatataatcgccgcaccttaatagaagaggctttgccaaagttactagaagcggtg
aacttatttggcggaagcaacaaccagcaactttccttgttcaatcaggagaatcgcgag
ctttatgctcctgaaattaagcaattgaatgagtatgatgatcgtcttcttttggagggg
gagcaagaaaccctgggtcagtccattagcgtcgaattatatagtgactatcgtccttac
taccaaaatggtcaaattcaacccatcaataagttaagcgataaaagtcaggtgacgatt
attggagaaattgtcaaggtgaaaagaattcaaacgaaaaagaaccagcccatggctttc
ttaactttgcgtgatgagcatagtgaagttgaggtgattgcttttcctaaagcttatatt
gattttgctgcctacataagggaaggccagcaagtccttgtccaaggcaagactcagacc
aggaaacaaggcttgcaagtggttttagaccagtgtcaacccttaaatcatcagttgctc
actgaattggaaaggaaacggctgaactcgattcaaacaataaacattcgcgtggcaagt
agccaggtggctagtgagaaaaaagcagacctccttgctcttatcaacaagtatcacggc
agggttaaattaactttcaccatggccaaagaacagaaaaaatatcaattgggtgagcgc
tttgctgttcaagcccgccccgaagtcattcaagaattaagaaaaatttacggctctgag
aatgttctttattaa
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integrated database retrieval system
