Aerococcus mictus: DBT49_0003995
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Entry
DBT49_0003995 CDS
T09409
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amit
Aerococcus mictus
Pathway
amit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBT49_0003995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amit03019
]
DBT49_0003995
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0003995
Enzymes [BR:
amit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBT49_0003995
Messenger RNA biogenesis [BR:
amit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBT49_0003995
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DBT49_0003995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
SNF2-rel_dom
TniB
Toxin_trans
Cas3-like_C_2
FliG_C
TRASH_HVO_1752_C
Motif
Other DBs
NCBI-ProteinID:
WMF95235
LinkDB
All DBs
Position
872656..874134
Genome browser
AA seq
492 aa
AA seq
DB search
MLEDLLATHFGYQSFRPGQKEILLHLQKRENTIGILPTAGGKSLIYQIYQYLNPGPILLI
SPLLALMEDQVSQLQALGFKASVAITSQLSKQEKNWLLHHLHDFQFIIMSPEMLSQPAVL
RRLRQIAIKLMVIDEAHCISQWGYDFRPEYSALRQFRQALNHPLTLALSGSASQNTLADI
AQHLFSDWESYQRVQCPLDRPNLFYGQLKLNEKDKFHHLNSLLETLPKPGIIYVHNKMEL
EELYQDLKASSQLKLASYHADKTSEERLQVQEQFQKGHLDAILATSAFGMGINQANVRFV
IHYHAPQSLADYLQESGRCGRDGQEALVLLYSNLQEISRLNYFKEQIDAQASPFYQGLNQ
AYQRADFLQSQTFLALEEQIQNLITYFYYNYSPQDKEQIQKDFQNYQKIKKNEIEQMIQY
LTLNSCYRRYLLSHFSKERISTNRFCCSHCQADFEDTATFKEYLTLAPKRLVNPKEKVLK
DWRARLNALFPS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagatctcttagcgactcactttggttaccagtcttttcgccctgggcaaaag
gaaattttactccacttacagaagcgagaaaacacgattggtattttacccactgctggc
ggcaagtcattgatttatcagatctaccagtatttaaatcccggtcccattttgcttatc
tcccctttgttggcattgatggaagaccaagttagtcagctgcaggcattaggttttaaa
gcaagtgtggcaataactagtcaattaagtaaacaagaaaaaaactggttacttcatcat
ctccatgactttcaatttattattatgtcaccagaaatgctttcccaacccgcagtctta
cggcgcttaaggcaaattgctatcaaactgatggtcattgatgaagcgcactgtatttct
caatggggctatgattttcgcccggagtacagtgctctcagacaatttcgccaagcctta
aatcatcctttaaccctagccctgagcggtagtgctagtcaaaatacactagcagatatt
gcccagcatttgtttagtgattgggaaagctatcagcgagtccaatgccccttggaccgc
cctaatttgttctatggtcaattgaagcttaatgaaaaggacaaatttcaccatcttaat
tccttgcttgagaccttaccgaagccgggaatcatttatgtccacaataaaatggagttg
gaagaactttaccaagatttaaaagcgagcagccagctaaagctcgccagctaccatgct
gacaagactagtgaggagcgcttgcaagtccaagagcaatttcaaaagggacatcttgac
gcgattttagccacatctgcttttggcatggggattaaccaggccaatgtacgttttgtt
attcactatcatgctccgcaatcattagctgactatctgcaagagagtggccgatgtggt
cgtgacggccaagaagctttggtattactttattctaatctccaagaaattagccgttta
aattattttaaagagcaaattgacgctcaagcttcgcctttttatcaaggattaaatcag
gcttatcagcgggctgattttttgcaaagtcagactttcttagcacttgaggagcaaatc
caaaatttaatcacttatttttactataattattcaccgcaggataaggagcagattcag
aaggactttcaaaactatcaaaaaataaagaaaaatgaaatcgaacaaatgattcaatac
ctcaccttaaatagctgttatcgtcgttacttgctaagtcatttttccaaggaaaggata
agtactaatcgcttttgttgctcgcattgtcaggctgattttgaagatacggcaactttt
aaggaatatctgaccttggcccctaagcgcttggtgaaccccaaagaaaaagtgttgaag
gattggcgggcgcgacttaatgccttatttcctagttag
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