Aerococcus mictus: DBT49_0004985
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Entry
DBT49_0004985 CDS
T09409
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amit
Aerococcus mictus
Pathway
amit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBT49_0004985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amit03019
]
DBT49_0004985 (recQ)
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0004985 (recQ)
Enzymes [BR:
amit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBT49_0004985 (recQ)
Messenger RNA biogenesis [BR:
amit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBT49_0004985 (recQ)
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DBT49_0004985 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
DNA_pol_lambd_f
DsrD
Pro-kuma_activ
HHH
DUF6809
Motif
Other DBs
NCBI-ProteinID:
WMF95395
LinkDB
All DBs
Position
1067235..1069025
Genome browser
AA seq
596 aa
AA seq
DB search
MLIEHALEKYFGYKTFRPGQKELIESILAGRDSLGILPTGGGKSICYQLPALILPGITLV
ISPLISLMKDQVDSLNEHGIHSVYLNSSLSSEDYFAVLERINSGHVKLIYISPERLKSES
FLQLANDLPLDQIAIDEAHCVSQWGHDFRASYREIANFIGLLNHRPVVSAFTATATNRVQ
QDIIHQLALENPYVLINSFDRPNLTFEVMEPESKKKTVMDLIDKEEAAIIYASSRKTVDR
LSEWLSDQGLPVSAYHAGMSPADRMASQNDFIYERTNIIVATNAFGMGIDKPDVRRVIHY
NLPTNLESYYQEAGRAGRDGLPARAILLYSPKDILTAKFLISQSNDPTSEGRLNDMINYA
TTSSCLRQHILAYFGQEAPDHCQNCSNCLQQVKKVDVSREGQMILSCIVRMAYPYGMTLV
TDVLKGKKLQKIKEKHFDQLSTYALLKDMNEQTIKNIISQLISEGALAVNEYKGLSLTKK
ALPILKGNKCLYIKESAYIRSENKTKTSQKAQSLTDHLSPEDEELFEALRELRYSLASEE
NVPAYIIFNNQSLLDMVEIKPKNYHEFLDISGVGPVKADKYADDFCQLIEDFVSIK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctaattgagcatgctttggaaaaatattttggctataaaacgtttcgccccggacaa
aaggaactcattgagagtattctagctggtcgcgatagtttggggattctacccactggc
ggaggcaaatcaatttgctatcaattacctgctttaatcttacctggtattactttagta
atctctcctttaatctcattaatgaaggaccaagtagatagtcttaatgaacatggaatt
catagtgtctatctaaactccagtctatccagtgaggattattttgctgtcctggaaagg
atcaattctggacatgtcaagctgatttatatatcaccagaaaggttaaagagcgagtct
tttctacaattagctaatgacttacccttagatcaaatagctattgatgaagcccactgt
gtttcccaatggggacacgactttagagcctcttatagagagattgctaactttattggt
ctgttaaatcaccgaccggttgtcagtgcctttacagccacagctaccaatcgggttcaa
caggatattattcatcaattggctcttgagaacccctatgtcctcattaattcctttgat
cgtcccaacctgacttttgaggtaatggaaccagaatcaaagaagaagactgtaatggat
ttaatagataaagaagaagcagctatcatttatgcttcttctcgaaaaactgttgatcgt
ttgagtgaatggctaagtgaccaaggccttccggtgagcgcttaccatgcgggaatgagc
ccagcagaccgtatggcttcgcaaaatgactttatctatgagcgtactaatatcattgta
gcaaccaatgcctttgggatgggaattgataaacctgatgttcggcgggtgatccattat
aacttgcccactaatttagagagttactaccaagaagcaggccgggcaggcagagacggc
ttgccggctagagccattcttctctacagccccaaggatatcttgaccgctaaattttta
attagtcaaagcaatgatcccactagtgaaggtcgcttaaatgatatgattaattatgca
acgacctcttcctgcttgagacaacacattttagcctacttcggtcaggaagctcctgac
cattgccaaaattgctccaattgtttgcagcaagtcaaaaaggttgatgtcagtcgagaa
ggacaaatgatcctctcttgtattgttagaatggcttatccttatggcatgaccctagtc
acagatgttttaaaaggtaaaaaactccaaaaaattaaagagaaacattttgaccaatta
tcaacctatgctttgttaaaagacatgaatgagcaaacaattaagaatattatttctcaa
ttaatttctgaaggggccttggcggttaatgaatataagggacttagccttacgaaaaag
gcgctacctattctaaaaggaaataagtgcctttatattaaagaatctgcctatattcga
tcagaaaataaaacgaagactagtcagaaagctcaatcattgactgatcatttatcgcca
gaagatgaagaattatttgaagcacttcgtgaattacgctatagtttagctagtgaagaa
aatgttcctgcctatattatttttaataaccagagtcttcttgatatggtggaaataaag
cctaagaactatcatgaatttcttgatattagcggggtaggtccagtaaaggcagataaa
tatgcagatgacttctgtcagttaatcgaagattttgtaagtattaaataa
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