Aerococcus mictus: DBT49_0005095
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Entry
DBT49_0005095 CDS
T09409
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amit
Aerococcus mictus
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amit03032
]
DBT49_0005095 (topA)
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0005095 (topA)
Enzymes [BR:
amit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DBT49_0005095 (topA)
DNA replication proteins [BR:
amit03032
]
Prokaryotic type
DNA Topoisomerases
DBT49_0005095 (topA)
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DBT49_0005095 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
HVO_A0556
DUF6495
Toprim_2
Zn_ribbon_RPB9
HypA
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WMF95416
LinkDB
All DBs
Position
1091173..1093263
Genome browser
AA seq
696 aa
AA seq
DB search
MATKRKKTPKKDLVIVESPTKAKTIEKYLGRKYKVVASKGHLRDLPKSKMGIDIENNYDP
HYITIRGKGDTIKDLKKEAKKANNIYLASDPDREGEAIAWHLAHILKLDPEEDIRVTYNE
ITKDTVKEAINNPRAIDKDLVDAQQARRILDRLVGYNLSPILWAKVKKGLSAGRVQSVAL
KMVVDREEEIRNFVPEEYWSIEGVFQKGKETFKANASKFKGKKIDLKNEDDVKALMANIT
SDQFEVQNLTKKQRKRNPQKPFTTSSLQQEASKRLRFRTRKTMMVAQQLYEGIKLGSEGT
VGLITYMRTDSTRISDGAKQEAGQFIQDKYGKEYIGKGTSGASGQGAQDAHEAIRPTSAF
RHPDSVEAYLSKDQFKLYSLIWSRFMASEMAPAVYDTVACDLVQNDVSFRANGSKIKFTG
YLRVYPDNNEKDNLLPELENGEKVKSKELTPNQHFTQPPARYTEASLIKTLEELGVGRPS
TYSPTLETLIKRYYVKLEARRFEPTELGEIVNSLISEFFPDIVDPQFTANLEDELDHVED
GNKNWIDVVDAFYQPFSKDIEKADKEMEKIEIKDEPAGFDCDVCGHPMVIKLGRYGKFYA
CSNFPDCRNTKAIVKEIGVNCPTCKEGQVVERKSKKKRIFYGCSRYPDCDFVSWDKPVGR
SCPKCDHYLVEKKKRGSKQVICSNCDYKEDVQKGDD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaaaaagaaagaaaacacctaaaaaagatttagtgattgtcgaatcaccaacg
aaagcaaaaacgattgagaaatacttaggacgtaaatataaagtggtggcaagtaagggc
cacttacgagatcttcctaaaagtaaaatgggaatagatattgaaaataattatgatccc
cattatattacaattcgtggtaagggagatacgatcaaagatcttaaaaaagaggcaaaa
aaagcaaataatatttacttagcttctgacccggaccgagaaggagaagcgattgcttgg
cacttagcccatattttaaaattagatcccgaagaagatatccgggtcacttataatgaa
attaccaaggatacggttaaagaagcgatcaacaatccacgcgccattgataaggacttg
gtggacgctcagcaggctagacggatcttagaccgcttggtgggctataacttgtccccc
attttatgggctaaggtcaagaagggcttatccgctggtcgggtgcaatccgttgcctta
aaaatggtcgttgaccgcgaagaggaaatccgtaactttgtgcctgaagaatattggagc
attgaaggcgtattccaaaaaggaaaagaaactttcaaggccaatgcctccaaatttaaa
gggaaaaagattgatctaaaaaatgaagatgatgtcaaagcattaatggctaatatcact
agtgatcaatttgaagttcaaaatttgaccaaaaagcaaagaaaaagaaatccgcaaaag
ccatttacgacttcttccctccaacaagaagcttccaaacgcttacgctttagaacgcga
aagaccatgatggttgctcaacagttatatgaagggattaaattaggcagtgaagggaca
gtgggtttaattacctacatgcgtactgactccacccggatttctgatggtgctaaacaa
gaagccggccaatttatccaagacaaatacggtaaggaatatatcggtaaggggactagc
ggggctagcggacaaggagcccaagatgcccatgaggctattcgaccgacttctgccttt
cgtcatcccgatagcgttgaagcttatctcagtaaagaccaattcaagctatatagtctt
atctggtctcgctttatggctagcgaaatggcaccagctgtctatgatacggtggcctgt
gatctggttcaaaatgatgtgagctttagggcaaatggatcaaaaattaaatttactggt
taccttagagtttatccggataataatgaaaaggataatctcttgccagaactagaaaac
ggtgaaaaggtaaagagtaaagaattaactcctaaccaacattttacccaaccaccagct
cgttacactgaagcaagcttaattaagactctagaagaattaggggttggtcgtccttct
acttactctccaactttagaaaccctgattaagcgctactatgttaaattagaagctaga
cgctttgaacccactgaattaggtgagattgttaatagtttaatttctgaatttttccct
gatatcgttgatccacaatttaccgctaacttggaagatgaattagaccatgtagaagac
ggtaataagaattggatagacgtcgttgatgctttctatcaaccttttagtaaggatatt
gaaaaagctgacaaagaaatggaaaaaatcgaaattaaagacgaaccagcaggctttgat
tgcgacgtctgtggtcatccaatggtaattaaattaggacgttatgggaaattttatgca
tgtagtaattttcctgattgccgtaatactaaggccattgttaaagaaatcggcgtgaat
tgcccaacctgtaaggaaggacaagttgtcgaacggaaatcgaagaaaaaacgaatcttt
tacggttgttcccgttatcctgattgtgattttgtttcctgggataaaccggtggggcgg
tcctgtcctaaatgtgaccattacttggttgaaaagaaaaaacgcggctctaaacaagtg
atttgtagcaattgtgactataaagaagatgtccaaaaaggcgatgattag
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