Aerococcus mictus: DBT49_0005390
Help
Entry
DBT49_0005390 CDS
T09409
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amit
Aerococcus mictus
Pathway
amit03410
Base excision repair
amit03430
Mismatch repair
amit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DBT49_0005390 (recJ)
03430 Mismatch repair
DBT49_0005390 (recJ)
03440 Homologous recombination
DBT49_0005390 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0005390 (recJ)
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DBT49_0005390 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DBT49_0005390 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DBT49_0005390 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WMF95475
LinkDB
All DBs
Position
complement(1159219..1161537)
Genome browser
AA seq
772 aa
AA seq
DB search
MLKANYEWQLRPSFDQLDLEKEQVIKETQLSPFLVDLLFQRGKQSSQEINDFLSEKPHFH
DPFLLHDMQKAIDRLEEAVRNNELILIYGDYDADGITATTILYELLESIGANVTYYLPDR
FVDGYGPNKEVYAYYIKQGVQLILTCDNGVAGHEAVKYAEDAGVNVIITDHHEIGNTLPE
AYAIVHPRHPEGNYPFDDLCGAGVAFKLAQAMTGGLPVEYLDVCAIGTIADLVRLEDENR
SIVQQGLKVMAHSERIGLMTLMKSQNIDLNHIDEETIAFNIAPRLNALGRLGSAKPGVEL
LTSFDPDYCQELVNTIETTNQKRRAIVDQVSQQAIQTVEEWEELPEIIILSHSNWHEGVL
GIVASRLVERYQRPSIILNYNAEKAEYKGSGRSVAGINLFKLLQAAKEYAPKSGGHAMAA
GMTIAEDQFEAWKAAIYQAVEPYKEQLQGKIPLTIDAKINADQLTLENIQELNRLKPFGA
ANPKPIFLIENESISTPQQLGKDKNTLKFSLTKENQQLEVIGFQKGNLANYLQAGQSVDL
VVEASINTWQGKSRPQAILLDMASDQKIIVDWRREKNPDLIFSLSQSYYYFESKSLIAQY
KGQIPSQSSLIGEEDLKKSREHYSQLVIFELPKNLQKLRDFVHNENIETIYLFSYSPISA
RKIGMPNRDQFALLYRYFIFYKELDLTEKKADLARYLKLPLPLLNLLLKVLVEAELLDQN
GQIYRIRPGQNKIDLKESTSLKNWAKQIEKENFLLNETIENLTRYFFQEDNL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggcaaattatgagtggcaattaaggccaagttttgatcaattggatttagaa
aaagagcaagtgattaaggaaactcaattgtcgccattccttgtcgacttactttttcag
agagggaaacaaagctctcaggaaattaatgattttttgagtgaaaagcctcattttcat
gatccctttctactccatgatatgcaaaaagccattgatcgtttagaagaagctgttaga
aataatgagcttatattaatctatggcgactatgatgccgatggaattacagcaaccacg
attctttatgaacttttagaatctataggggctaacgtaacgtattacttaccagaccgc
tttgtggatggctatggccctaataaggaagtgtatgcctactacattaagcaaggggtc
caattaattctaacctgtgataatggtgttgccggtcatgaggcagtgaaatatgccgaa
gatgctggcgttaatgtcattatcactgaccaccatgaaattggaaacactttacctgag
gcctatgctattgttcatcccagacaccctgaggggaattatccctttgatgatttatgt
ggagctggagtagcctttaagttagcccaagcgatgactggtggcttaccagtcgaatat
ttggatgtctgtgctattggaacaatcgctgatctggtccgcttagaggatgaaaatcgc
agcattgttcagcagggcttaaaggttatggctcatagtgaaagaattggtctaatgact
ttaatgaaaagtcaaaacattgatctaaaccatatcgatgaagaaactatcgcctttaac
atagccccacgacttaatgctctaggtcgtctaggctcggctaaaccaggagttgaacta
ctcacgagtttcgacccggattattgtcaggaactagttaataccattgaaacgaccaat
caaaaacgacgagcaattgttgaccaggttagtcagcaagcgattcagacagtcgaagag
tgggaagaattaccagaaattatcattttatctcattccaattggcatgaaggggttcta
ggtattgtggctagtcgactggtagagcgttatcagcggcctagtatcattttaaattat
aatgctgagaaggcagaatataaggggtcaggtcgttcagttgcaggaatcaacctcttc
aagcttctccaagctgcaaaggaatatgcccctaagagtgggggacatgccatggcagct
ggtatgaccattgctgaagaccaatttgaagcttggaaagcggcaatctatcaggcagtt
gagccctacaaagagcaattacaagggaagattcctttaacaattgacgccaagattaat
gccgatcaattgaccttagaaaatattcaggagcttaatcgcttaaaaccatttggtgca
gcgaatcccaaacctatatttttaatcgaaaatgaatcgatctcaacgccacagcaatta
ggaaaagataagaacaccttaaaattttctttgactaaggaaaatcaacagctagaagtt
atcggttttcagaagggaaatttggctaattatttacaggctggtcaaagtgttgatctg
gttgtcgaagcatccattaatacctggcagggaaaaagtcggccacaagctattttactc
gatatggctagcgaccaaaaaataatcgttgactggcgaagagaaaaaaatcctgacctt
attttttctctttcccaaagctattattattttgaaagcaagtccttaattgctcaatat
aaggggcagattcctagtcaatcttctttaataggggaagaagacttgaagaagagcagg
gaacattatagccagttagttatttttgaactaccaaaaaatttgcaaaagctaagagac
ttcgttcataatgagaatatagaaacgatctatctattttcatatagtccgatatcagca
agaaaaattggtatgcccaatcgcgatcaatttgctttgctttatcgttatttcattttc
tataaagaacttgatttgaccgaaaaaaaggcagacttggctaggtatttaaagctaccg
cttcctcttcttaacttattactaaaagttttagttgaagcagagcttttagaccaaaat
ggccagatttatcgtattcgaccaggccagaataagatcgatttgaaagagtcaaccagc
ctaaaaaattgggcaaagcaaattgaaaaagaaaactttcttttaaatgaaaccattgaa
aatttaactcggtattttttccaggaggataatttatga
DBGET
integrated database retrieval system
