Aerococcus mictus: DBT49_0005710
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Entry
DBT49_0005710 CDS
T09409
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amit
Aerococcus mictus
Pathway
amit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DBT49_0005710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amit03400
]
DBT49_0005710
Enzymes [BR:
amit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DBT49_0005710
DNA repair and recombination proteins [BR:
amit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBT49_0005710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD_C
CodY
UvrD-helicase
nSTAND3
AAA_12
AAA_28
T2SSE
HHH_5
AAA_25
NPHP3_N
TrwB_AAD_bind
AAA
AAA_29
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WMF95538
LinkDB
All DBs
Position
complement(1226741..1229206)
Genome browser
AA seq
821 aa
AA seq
DB search
MTVTEDYFIGEVEATFFSNPDNYYRVMRITVDDTNTLYSEKNIVVTGNFGTIQDGTTYQF
FGNLVDHPKYGVQFKVSHYEVIKITSRDGLIKYLSSDEFPGIGKILAERVVNTLGEKTID
LIVNQPERLKDVKGLTKNKQQMLHEKVKANRGNEDTFIQLSEMGFSNHLAGKIYAKYQDE
AVELIKENPYFLVKNIQGFGFQKADLLAQRLDFAYDSPLRIQGAITFSLETICYSNGDTY
VKKEELFQQVLNLLNKSQMNLQMVDMQQVADRLSDLVDTNEVIATEEGYFLPSLYYAEKG
IVKRLKRIKNERTQPKYENDNLANEIEETEAKLGIQYGPAQRKAIIEALEEKLFILTGGP
GTGKTTVLEGIIDIYCRLNNIRLGDYDPSDFPIRLAAPTGRAAKRMSETTGLVATTIHRL
IGLTGEEDENNIITSDKETIEGDLLIIDEMSMVDTWLFFQLLEAVPDDMQIILVGDKDQL
PSVGPGQVLSDLLRSQTIAWRELDEIFRQDANSTITLLAHDIKNGEMPVDLTQNKADRSF
FRVDYFHLADFIAAVAKRALEKDYDVKDIQVLAPMYKGQAGIDQINQKLQEGLNPNTDGN
KRQLSHFNRLFRLGDKVLQLQNQAEMNVFNGDMGEIVAIFYAKETTSQSDEIVVDFDGNE
VTYNRQDFNQLTLAYCVSIHKSQGSEFPIVILPLINQYQRMLQRNLLYTAITRAKQSLIL
CGEVQAFQSAIQTQASQRHTNLYRSLLEEDELLPKLNSQPSESSPRQDQSTRSQGDESGG
QQEDPGNSGMNVKVDWLTPALLESGQIDPLIGMDGISPYDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaacggaagattatttcatcggcgaagttgaagctacctttttttctaatcca
gataattattatcgggtgatgcggattacggttgatgataccaacaccctttactccgaa
aaaaatattgtcgtgacaggaaattttggaactatccaggacggaactacataccaattc
ttcggaaacttagttgatcatcctaagtacggggtacaattcaaagtctcccattatgaa
gtaataaaaattaccagtagagatggcttaatcaaatatttatccagcgatgaatttcct
ggaattgggaaaatattggctgagcgggtggtcaataccttaggtgagaagaccattgac
ttaattgttaatcagcccgaacgtttaaaagatgttaagggcctgaccaagaataaacaa
caaatgctacatgagaaagtaaaggctaatcgtggcaatgaggatacctttattcaatta
tcggagatgggtttttctaaccacttggcaggcaagatttatgctaaataccaagatgaa
gcggtggaattgattaaagaaaatccctatttcttggttaaaaatattcagggctttggt
tttcaaaaggctgatttactggcccaacgtttagactttgcctatgactcgcctttacgc
atccaaggggcgattactttttcattagaaacaatttgttatagcaatggagatacttat
gttaagaaggaagaactcttccagcaggttctcaatctattaaataaaagccaaatgaat
ctgcaaatggttgatatgcagcaagtggctgaccgtttgagcgacttggtagataccaat
gaagtgattgcgactgaagagggttattttcttccgagtctctattatgcagagaagggg
attgttaaacgtttaaaacgtatcaagaatgaacgaactcagcctaaatatgagaatgat
aatttggctaatgaaatagaggaaaccgaagcaaaattaggtattcaatatggacccgct
caaaggaaggcaattattgaagccctagaagagaaattatttattctaaccgggggaccg
ggtacgggaaaaaccacggttttagaaggaatcatcgatatttattgccggttaaataat
atccgcttaggggattatgacccgagtgattttcctattcgtttggcagctccaactgga
cgggctgccaagcggatgagtgaaactactggcctagtggcaaccactattcatcgttta
atcggtctcaccggtgaagaagatgaaaataatatcataacttcggataaagagactatt
gaaggggacttactgattattgatgagatgtctatggtagatacctggttattctttcaa
ttattagaagcggttcctgatgatatgcaaattatattggtaggggataaagatcaattg
ccctcagttggtccaggacaagtgctgtcagacctcttgagaagtcagacaatcgcctgg
cgcgagctcgacgaaatatttcgtcaagatgccaattcaaccattactttattggctcat
gatataaaaaatggggaaatgcctgtcgatcttacccaaaataaggctgaccggtcattt
ttccgggtagattatttccacttagctgattttattgcagcggtggctaaacgtgctctt
gaaaaagattatgatgttaaagatattcaagttttggcccccatgtataagggtcaggcc
ggcatcgatcagattaaccagaaattgcaggaaggtttaaatccaaatactgatggcaat
aagcgccaacttagccacttcaaccgtctttttcgcttaggggataaggtcttgcagttg
caaaaccaagctgaaatgaatgtctttaacggggatatgggagaaatcgtggcgatattt
tatgccaaggaaacgaccagccaaagtgatgaaatagtggttgatttcgacggcaatgag
gtcacatacaaccggcaagattttaaccagttaaccttggcgtattgcgtctcaattcat
aaatcgcagggaagcgaatttcctatcgttatcctccccttaatcaaccaataccaacgc
atgctccaacgcaatttactctatacagcgatcaccagagctaagcaatccttaattctc
tgcggtgaagtccaagccttccaatctgccattcaaacccaggccagccaacgccatact
aacctttaccgctccctacttgaagaagacgaattacttcctaaactgaactcgcagcca
agtgaatcaagtcctcgtcaggatcaaagtaccaggtctcaaggagatgagtcagggggc
cagcaagaggatcctggaaactcgggaatgaatgtgaaagtcgattggttaacccctgcc
ttacttgaaagtggtcagatcgatcctttaattggtatggatggcatcagcccctatgat
ttttaa
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