Aminobacter sp. MDW-2: H5P29_12695
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Entry
H5P29_12695 CDS
T11718
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
amiw Aminobacter sp. MDW-2
Pathway
amiw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5P29_12695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amiw03400
]
H5P29_12695 (uvrB)
DNA repair and recombination proteins [BR:
amiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5P29_12695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H5P29_12695 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Microtub_bd
SWI2_SNF2
DUF87
Motif
Other DBs
NCBI-ProteinID:
QNH36678
LinkDB
All DBs
Position
complement(2601303..2604356)
Genome browser
AA seq
1017 aa
AA seq
DB search
MAKSPDKKSPALGSDNRAAQRKRGGNGVTDFLDASEPLHRPGFGEAPQAAFSGAPLSGSI
SDWAEEIAREAEKPQPKAKKIPEKSSAPTRSARGTSMGGAASAKERAAAGLNPVAGLDIS
LEDAASLSNSGVTATVAALSALIESGNPLHKNGEIWVPHRPARPEKSEGGIQIVMQSEFE
PAGDQPTAIKDLVEGVGNADRTQVLLGVTGSGKTFTMAKVIEQTQRPALILAPNKTLAAQ
LYAEFKKFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESTINEQIDRMRHSATRSLLE
RDDVIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRQDINFVRGS
FRVRGDTIEIFPAHLEDSAWRISLFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTP
RPTLNQAIKSIKEELQHRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRY
LTGRRPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPLSVAVSATPGSWEMEETGGVFAEQVIRPTGLIDPPVEVRPAKNQV
DDVVGEIRATTQAGYRTLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTLERIEILRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADQITGSMERAMAETTRRREKQMVWNEANGITPESVKSRISDILDSVYEKDHVRADISQ
FTDGAGAMMGNNLKAHLEALDKQMRNAATDLDFEKAARIRDEIKRLRDMELAISDDPLAR
EVEGQSPASGREKGKHNKGVAKHRTVEEQERFRKLDEARAAEEAAKAARPNLFRKPKLDE
MGADGTVPAGKSLFAKPHIDDMGPGTDMTTPAGAVSRSLFKKQSAAEAHGSDYGVPDDGK
SLFRKNDLDEMTVRRTEKPVEGVKPIKRAKIGAGSYEDPAEAARAKKKPGKSGRPGQ
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcctgacaagaaatcgcccgctctgggaagcgacaaccgtgccgcacag
cgcaagcgcggcggcaatggcgtaaccgacttcctcgacgcttccgagccgttgcatcgc
cccggtttcggcgaagcgccgcaggccgcgttctcgggcgcaccgctgtccggttcgatt
tcggattgggccgaagagattgcccgcgaggctgagaagccccagcccaaggccaagaaa
atcccggagaagagctcggccccgacccgttcggcgcgtggcacctcgatgggcggtgct
gcctccgccaaggagcgtgccgccgccggtctcaaccctgtcgccggcctcgacatttcg
ttggaggacgcggcgtcgctgtccaactccggcgtcaccgccaccgtcgcggcgctctcg
gccctgatcgagagcggcaacccgctgcacaagaacggcgagatctgggttccccaccgc
cccgctcgaccggaaaaatccgaaggtggcatccagatcgtcatgcagtcggaattcgag
ccggccggcgatcagcctactgccatcaaggacctcgtcgagggcgtcggcaatgccgac
cgcacccaggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgagcagacgcagcgcccggcgctgattctcgcgcccaacaagacgctggcagcccag
ctctatgccgagttcaagaagttcttccccgacaacgcggtcgagtatttcgtctcctat
tacgactactaccagcccgaggcctacgtcccgcgcaccgacacctatatcgagaaggaa
tcgaccatcaacgagcagatcgaccgcatgcgccattcggcgacgcgctcgctgctcgaa
cgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggtatcggctcggtcgag
acctacacggcaatgaccttccagatgcaggtcggcgaccgcctcgatcagcgccagttg
ctcgccgacctcgtcgcccagcaatacaagcgccaggacatcaatttcgtccgcggctcg
ttccgtgtccgcggcgacaccatcgagatcttccccgcccacctggaagactcggcatgg
cgcatctcgctgttcggtgacgaaatcgatgccatcaccgagttcgatccgctcaccggc
cagaagaccggcgacctcaagtcggtcaagatctacgccaattcgcactatgtgacgccg
cggcccaccttgaatcaggccatcaagtcgatcaaggaagagctgcagcatcgcctgcaa
gagcttgaaaaggctggccgcctgcttgaagcccagcgcctggaacagcgcacccgcttc
gacctggagatgctggaagcgactggctcctgcgccggcatcgaaaactattcacgctat
ctcaccggccgccgccccggcgatccgccgccgacgctgttcgagtacatccccgacaat
gcgctcgtcttcatcgacgaaagccacgtcaccgtgccccagatcggcggcatgtaccgg
ggcgacttcaggcgaaaggcgacgctggccgaatacggcttccgcctgccctcctgcatg
gacaatcggccgctgcgtttcgaggaatgggacgccatgcgcccgctctcggtcgccgtg
tcggcgacgccggggagctgggagatggaagagactggcggcgtctttgccgagcaggtc
atccgcccgaccggcctgatcgacccgccggtcgaggtgcgcccggccaagaatcaggtc
gacgacgtcgtcggcgagatccgtgccaccacccaggccggctaccgcacgctggtcact
gtgctgaccaagcgcatggccgaggacctgaccgaatacctgcacgagaacggcgtccgc
gtccgttacatgcactccgacatcgacacgctggagcgcatcgagattcttcgcgacctg
cgccttggcgcttttgacgtgctggtcggcatcaaccttttgcgcgaaggccttgatatt
cccgaatgcggtttcgtcgccattctcgatgccgacaaggagggtttcctccgctcggaa
acctcgctgatccagaccatcggccgcgcggctcgtaacgtcgacggcaaggtcatcctc
tacgccgaccagatcaccggctcgatggagcgcgcaatggccgagaccacgcgccgccgc
gaaaagcagatggtgtggaacgaagccaacggcattacgccggagagcgtcaagtcgcgc
atctccgacatcctcgactcggtctacgagaaggatcacgtccgcgccgacatctcgcag
ttcaccgacggtgccggtgccatgatgggcaacaatctgaaggcccatctcgaagcgctc
gacaagcagatgcgcaacgccgccaccgacctcgatttcgagaaggccgcccgcatccgc
gacgagatcaagcgcctgcgcgacatggagctcgccatttcggacgatccgctggcgcgc
gaggtcgagggccaaagccccgcttccggccgcgagaaaggcaagcacaacaagggcgtc
gccaagcaccgcacggtcgaggaacaggagcgtttccgcaagctggacgaggcccgcgcc
gccgaggaagcggccaaggctgcccgcccgaacctgttccgcaagccgaagctcgacgag
atgggcgccgacggtacggttcccgcaggcaagtcgctgtttgccaagcctcacatcgac
gacatgggaccaggcaccgacatgaccacgcccgccggcgcggtctcgcggtcgctgttc
aagaagcagtcggccgccgaagcccacggctccgattacggcgtccctgacgacggcaag
tcgctgttcaggaagaacgacctcgacgagatgaccgtccgccgcactgaaaagccggtc
gaaggcgtcaagccgatcaagcgcgccaagatcggcgccggctcctacgaggatccggcc
gaagccgcgcgtgcgaaaaagaagccgggcaaatcagggcggccagggcaatag
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integrated database retrieval system
