Aminobacterium sp. MB27-C1: RBH88_00305
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Entry
RBH88_00305 CDS
T09908
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amiz
Aminobacterium sp. MB27-C1
Pathway
amiz00061
Fatty acid biosynthesis
amiz00071
Fatty acid degradation
amiz01100
Metabolic pathways
amiz01212
Fatty acid metabolism
amiz02024
Quorum sensing
amiz04146
Peroxisome
Module
amiz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBH88_00305
00071 Fatty acid degradation
RBH88_00305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBH88_00305
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBH88_00305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amiz01004
]
RBH88_00305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amiz04147
]
RBH88_00305
Enzymes [BR:
amiz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBH88_00305
Lipid biosynthesis proteins [BR:
amiz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBH88_00305
Exosome [BR:
amiz04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBH88_00305
Exosomal proteins of breast cancer cells
RBH88_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WMI71557
LinkDB
All DBs
Position
59636..61120
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AA seq
494 aa
AA seq
DB search
MTKRLEEIALAHLEKDRESGILWWNGSWITGDAILNAVQLCKKNLEEKGFTAGDRLVVFL
PNSPLVLYLSLAVWVLGGTIVPLNSRTGKDSVLAMLDHIRPWGAVTASDTGVIAEALALS
SYPWTVASLDGVIPSLEGKHIEKGDSDIAVIFATSGTTGDPKAVPLTHANLYDNTSKVQT
TIEGFEQGKVLLNVLPNFHSLGYTICGLLPILWGLKEVIVSSFMPVRNFFNALRESETNV
LIAVPSMLPFLLGAVSRGEILPSSLQYILTGGGALEPELEQRVRDTFGVIIYQGYGLTEC
SPVVSCNPNDSMRKEGTVGPALPGYSLDVRDEEGHSLPKGSEGVLWVKGPSVTSGYLKAP
TLTEQRFSDGWFNTGDMVNLDEDGFITILDRVSDMLIVSGFNVFPQEIERVIKRHPDVKE
AAVIGERHSVSGEIPVAFVIREENSGLSSAELTSFCKEQLAYYKIPRKIRFVRELPLSSV
GKVLKRKLREQQEE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacgcttagaagaaattgctttagcccatttagaaaaggatagagaaagtgga
attctttggtggaatggctcctggataacaggagatgctattttgaatgcagtacagtta
tgcaaaaaaaacctggaagaaaaaggatttacagcaggagatcgccttgttgtttttctt
cctaactcacccctcgtcctttatctttctctagccgtatgggtgcttggcggaacgatc
gttccattaaacagtcgcacgggaaaagattcagttctcgctatgcttgatcatatacga
ccctggggggctgtaacagcaagtgatacaggtgtgattgccgaggcccttgccctctct
tcgtacccttggacagttgcttcccttgatggggtgattccttctcttgaaggcaaacat
attgaaaagggtgactctgacattgccgtaatttttgccacatcaggtacgactggcgat
ccgaaagctgttcctcttacccatgctaatctttatgacaatacatcgaaagtccagaca
acaatagaaggttttgagcagggaaaggttttattaaacgtattacctaatttccactca
ttgggatataccatttgtggtttgctccctatattatggggacttaaagaagttattgtc
tcttcatttatgcctgtgcgtaactttttcaatgctcttcgtgaatctgaaacaaacgtt
cttattgcagttccatccatgttgccttttcttttgggggcagtcagcagaggagaaatt
ttaccatcatctctccaatatatactgacaggcggtggagctctggaaccagaattggaa
caacgtgttcgcgatacctttggcgttattatttatcaaggttatgggctcaccgagtgt
tctccagtggtttcgtgcaaccctaacgactctatgagaaaagaaggaacggtagggccg
gctctgcctggttactctctcgatgtacgagatgaagaagggcattctcttcccaaaggt
tcggaaggtgttctttgggttaaaggaccatcagtaacttcgggatacttaaaagcccca
actctgactgaacaacgtttttccgatggctggtttaacacaggagacatggttaacctt
gatgaagatggtttcattactattctcgacagggtgagcgatatgcttatcgttagtggt
ttcaatgtctttcctcaggaaattgagcgtgttatcaagcgtcatcctgatgtgaaagaa
gccgctgttattggagaaaggcactctgtaagtggtgaaatcccggttgcttttgttatt
agagaggaaaatagcggtctttcttctgcagaacttacttcattttgtaaggaacaattg
gcctattataaaattcctcgaaagatacgttttgttcgagaacttccactttcaagtgta
ggtaaagtcttaaagcgaaaattgagagaacaacaagaagaataa
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