KEGG   Aminobacterium sp. MB27-C1: RBH88_03915
Entry
RBH88_03915       CDS       T09908                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
amiz  Aminobacterium sp. MB27-C1
Pathway
amiz03030  DNA replication
amiz03410  Base excision repair
amiz03420  Nucleotide excision repair
amiz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amiz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RBH88_03915 (polA)
   03410 Base excision repair
    RBH88_03915 (polA)
   03420 Nucleotide excision repair
    RBH88_03915 (polA)
   03440 Homologous recombination
    RBH88_03915 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amiz03032]
    RBH88_03915 (polA)
   03400 DNA repair and recombination proteins [BR:amiz03400]
    RBH88_03915 (polA)
Enzymes [BR:amiz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RBH88_03915 (polA)
DNA replication proteins [BR:amiz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RBH88_03915 (polA)
DNA repair and recombination proteins [BR:amiz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RBH88_03915 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RBH88_03915 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2 DNA_pol_lambd_f HHH MinC_N Sec3_C-term
Other DBs
NCBI-ProteinID: WMI72261
LinkDB
Position
812595..815156
AA seq 853 aa
MNTLKNKTILLVDGHALAFRAFYALPELTAPDGTPTNAILGFVNMMFKTIDECHPDMTAV
IFDAPGKTFRHDVYPEYKMGRRPTPEEYKIQVPILLELLRAMGIKVVVKDGVEADDVIAS
AACGATRLGVNVVALTSDKDILQVLQPGVRVIRPKKGITIFTEYNEITFEEEWGFAPTAM
PDYLALLGDSVDNIPGVPGVGEKTAKKLLSQYKSLEDIYDHIEELKPGLQKKFSTSKELA
FKSRELIRLKCDLPLTVEEFVQTDVDFETFENMCRQLGLNKILERVRNSTHHESEEQPQL
EIGEAVEGDLEKVLQEKELALYCAAEGSYPMDLNRALIVLRAQNGHFWRGVVEAQHIPDS
LSKWLKTGNVITSDYKTTQAFFKEEVPLHDHVWDAQVAHYLLHPDAKSHGPEQWAAEAVS
DPVDVAGQLWRVQNELGNAISHYSGLEDLMRQVELPIVPVLWKMETWGIGLEKKTFEGLD
TDLEERIADIENTIAEKGGERINLNSPKQVAWLLFEKLQMPPIKETKTGYSTDVTVLEEL
VKMDLPEKIVPELILEHRELSKMRSGFVHPLMSAVNEKTGLIHGTFESTSTGTGRLSSRD
PNLQNLPAFGQWSTRLKEGLVPRHEGNVYVAADYSQVELRVLAHLCDEKRLKSAFEDHRD
VHTETASWVFNVEPELVTPELRRFAKVINFGILYGMSSYGLAARLGIGQQEAGDIINKYF
KALPKVKDYVEESYKEARQRGYAMTSFGRIRPLNEVSVNPRDRGALKRIAVNTPIQGTAA
DIARMAMIKFFHHFEGRKNVHLVLQIHDSLVCECAAEEREGIEKELANVMESAAKLSVPL
KVETKWGKSLANV
NT seq 2562 nt   +upstreamnt  +downstreamnt
ttgaataccctgaaaaataaaacgattttacttgttgatgggcacgctctggctttcaga
gccttttacgcccttccagaacttacggcaccagacggaacgcctacaaacgccattttg
ggctttgtcaatatgatgttcaaaaccattgatgaatgccatcccgacatgacagcggtt
atctttgacgctcctggcaaaacctttcgacacgatgtctatccggaatacaaaatggga
cgtcgccctacgcctgaagagtataagatacaggttcccattctgctggaattactccga
gctatgggtataaaagttgttgtcaaagatggggtggaggctgatgacgttattgcttcc
gctgcctgtggcgctacgcgcctgggcgttaatgtcgttgcactgacatcggataaagac
atactccaggtgcttcagcctggcgttcgcgtcatccggcctaaaaaaggaattaccatc
tttaccgaatataacgaaataacctttgaagaggagtgggggttcgcgccgacggcaatg
cccgactatctggcactgcttggagacagtgtcgataacattccaggggttcccggagtg
ggagaaaaaacggctaaaaagcttctctctcaatataaatcccttgaagatatttacgat
catatagaagagctcaaaccaggcttgcagaagaaattctctacgtcgaaagagttggcc
ttcaaaagccgcgaactcatacgcctcaaatgcgatttgcctttgacagttgaagagttt
gttcagaccgatgtagatttcgaaacctttgaaaacatgtgccgtcagttgggcctgaac
aaaatattggagcgagtaaggaattcaacgcaccacgaatcagaagagcagccgcaactt
gaaataggagaggctgtggaaggcgatctcgaaaaggttcttcaggaaaaagaactcgct
ctctactgcgcggcagaaggatcctatcccatggatcttaatagagctctcattgtcttg
cgggcccagaatggacacttctggcgaggagtcgtcgaggctcagcatattcctgattcc
ctctcgaaatggttgaaaacaggcaatgtaattacctcagactataaaacgacacaggca
ttcttcaaagaagaggttccattacacgaccatgtctgggacgcccaggttgctcactac
cttcttcatcctgacgccaaaagccacggaccggagcagtgggcggcagaggctgtttct
gacccagttgacgttgcggggcagctctggagggttcaaaatgagcttggaaacgctatc
tctcactacagtggcctggaagaccttatgcgtcaggttgagctgcctatcgttcccgta
ttgtggaaaatggagacgtggggcattggccttgagaaaaaaacctttgaaggtctggat
acagatttagaagaacgaattgcagacattgaaaataccatcgctgaaaagggcggggag
cgtatcaatctcaactctcccaaacaggtagcgtggcttctcttcgagaaattgcagatg
ccgcctatcaaagaaacaaaaacaggctattccacagatgttacggttcttgaagagctt
gtaaagatggatcttcccgagaaaatcgtgccagaacttattctggaacatcgcgaactc
tctaaaatgcgctcaggttttgtccatcccctcatgagtgccgtaaatgaaaagacagga
ttgattcacggcacctttgaatccacatcgacgggaacagggcggctgagcagcagagac
cccaaccttcagaatctccctgcttttgggcaatggtcaactcgactcaaggaaggcctg
gttcctcggcatgaagggaatgtctatgttgcggcagactattcacaggttgaactacgt
gtattggcccatctttgcgatgagaagcgattgaaatcggcctttgaggatcatcgggat
gttcatacagaaacggcatcgtgggtctttaacgtcgaaccggaacttgttactcctgaa
cttcgccgttttgccaaagttataaattttggtattctttacggtatgagttcctacggt
ttggcggctcgtttgggaatagggcagcaggaggcgggagatattatcaataaatacttc
aaggcccttcctaaagtaaaagactacgttgaagaaagctataaagaagctagacaacgt
ggatatgccatgaccagtttcggcagaatacggccactcaacgaagtctctgtcaatccg
agagaccggggagccttgaagcgcatagccgtaaacactcccatacagggaacagcggct
gatattgcccgaatggctatgatcaagtttttccatcatttcgagggacgcaaaaacgtt
catctcgtattgcagattcatgactctcttgtgtgcgaatgcgctgcagaggaacgggaa
ggcatagaaaaagagcttgcaaatgtaatggaatctgcggctaaactttctgtgccattg
aaggtagagaccaagtggggaaaatccctcgctaatgtctag

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