Aminobacterium sp. MB27-C1: RBH88_03915
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Entry
RBH88_03915 CDS
T09908
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amiz
Aminobacterium sp. MB27-C1
Pathway
amiz03030
DNA replication
amiz03410
Base excision repair
amiz03420
Nucleotide excision repair
amiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH88_03915 (polA)
03410 Base excision repair
RBH88_03915 (polA)
03420 Nucleotide excision repair
RBH88_03915 (polA)
03440 Homologous recombination
RBH88_03915 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amiz03032
]
RBH88_03915 (polA)
03400 DNA repair and recombination proteins [BR:
amiz03400
]
RBH88_03915 (polA)
Enzymes [BR:
amiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH88_03915 (polA)
DNA replication proteins [BR:
amiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBH88_03915 (polA)
DNA repair and recombination proteins [BR:
amiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBH88_03915 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBH88_03915 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
DNA_pol_lambd_f
HHH
MinC_N
Sec3_C-term
Motif
Other DBs
NCBI-ProteinID:
WMI72261
LinkDB
All DBs
Position
812595..815156
Genome browser
AA seq
853 aa
AA seq
DB search
MNTLKNKTILLVDGHALAFRAFYALPELTAPDGTPTNAILGFVNMMFKTIDECHPDMTAV
IFDAPGKTFRHDVYPEYKMGRRPTPEEYKIQVPILLELLRAMGIKVVVKDGVEADDVIAS
AACGATRLGVNVVALTSDKDILQVLQPGVRVIRPKKGITIFTEYNEITFEEEWGFAPTAM
PDYLALLGDSVDNIPGVPGVGEKTAKKLLSQYKSLEDIYDHIEELKPGLQKKFSTSKELA
FKSRELIRLKCDLPLTVEEFVQTDVDFETFENMCRQLGLNKILERVRNSTHHESEEQPQL
EIGEAVEGDLEKVLQEKELALYCAAEGSYPMDLNRALIVLRAQNGHFWRGVVEAQHIPDS
LSKWLKTGNVITSDYKTTQAFFKEEVPLHDHVWDAQVAHYLLHPDAKSHGPEQWAAEAVS
DPVDVAGQLWRVQNELGNAISHYSGLEDLMRQVELPIVPVLWKMETWGIGLEKKTFEGLD
TDLEERIADIENTIAEKGGERINLNSPKQVAWLLFEKLQMPPIKETKTGYSTDVTVLEEL
VKMDLPEKIVPELILEHRELSKMRSGFVHPLMSAVNEKTGLIHGTFESTSTGTGRLSSRD
PNLQNLPAFGQWSTRLKEGLVPRHEGNVYVAADYSQVELRVLAHLCDEKRLKSAFEDHRD
VHTETASWVFNVEPELVTPELRRFAKVINFGILYGMSSYGLAARLGIGQQEAGDIINKYF
KALPKVKDYVEESYKEARQRGYAMTSFGRIRPLNEVSVNPRDRGALKRIAVNTPIQGTAA
DIARMAMIKFFHHFEGRKNVHLVLQIHDSLVCECAAEEREGIEKELANVMESAAKLSVPL
KVETKWGKSLANV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccctgaaaaataaaacgattttacttgttgatgggcacgctctggctttcaga
gccttttacgcccttccagaacttacggcaccagacggaacgcctacaaacgccattttg
ggctttgtcaatatgatgttcaaaaccattgatgaatgccatcccgacatgacagcggtt
atctttgacgctcctggcaaaacctttcgacacgatgtctatccggaatacaaaatggga
cgtcgccctacgcctgaagagtataagatacaggttcccattctgctggaattactccga
gctatgggtataaaagttgttgtcaaagatggggtggaggctgatgacgttattgcttcc
gctgcctgtggcgctacgcgcctgggcgttaatgtcgttgcactgacatcggataaagac
atactccaggtgcttcagcctggcgttcgcgtcatccggcctaaaaaaggaattaccatc
tttaccgaatataacgaaataacctttgaagaggagtgggggttcgcgccgacggcaatg
cccgactatctggcactgcttggagacagtgtcgataacattccaggggttcccggagtg
ggagaaaaaacggctaaaaagcttctctctcaatataaatcccttgaagatatttacgat
catatagaagagctcaaaccaggcttgcagaagaaattctctacgtcgaaagagttggcc
ttcaaaagccgcgaactcatacgcctcaaatgcgatttgcctttgacagttgaagagttt
gttcagaccgatgtagatttcgaaacctttgaaaacatgtgccgtcagttgggcctgaac
aaaatattggagcgagtaaggaattcaacgcaccacgaatcagaagagcagccgcaactt
gaaataggagaggctgtggaaggcgatctcgaaaaggttcttcaggaaaaagaactcgct
ctctactgcgcggcagaaggatcctatcccatggatcttaatagagctctcattgtcttg
cgggcccagaatggacacttctggcgaggagtcgtcgaggctcagcatattcctgattcc
ctctcgaaatggttgaaaacaggcaatgtaattacctcagactataaaacgacacaggca
ttcttcaaagaagaggttccattacacgaccatgtctgggacgcccaggttgctcactac
cttcttcatcctgacgccaaaagccacggaccggagcagtgggcggcagaggctgtttct
gacccagttgacgttgcggggcagctctggagggttcaaaatgagcttggaaacgctatc
tctcactacagtggcctggaagaccttatgcgtcaggttgagctgcctatcgttcccgta
ttgtggaaaatggagacgtggggcattggccttgagaaaaaaacctttgaaggtctggat
acagatttagaagaacgaattgcagacattgaaaataccatcgctgaaaagggcggggag
cgtatcaatctcaactctcccaaacaggtagcgtggcttctcttcgagaaattgcagatg
ccgcctatcaaagaaacaaaaacaggctattccacagatgttacggttcttgaagagctt
gtaaagatggatcttcccgagaaaatcgtgccagaacttattctggaacatcgcgaactc
tctaaaatgcgctcaggttttgtccatcccctcatgagtgccgtaaatgaaaagacagga
ttgattcacggcacctttgaatccacatcgacgggaacagggcggctgagcagcagagac
cccaaccttcagaatctccctgcttttgggcaatggtcaactcgactcaaggaaggcctg
gttcctcggcatgaagggaatgtctatgttgcggcagactattcacaggttgaactacgt
gtattggcccatctttgcgatgagaagcgattgaaatcggcctttgaggatcatcgggat
gttcatacagaaacggcatcgtgggtctttaacgtcgaaccggaacttgttactcctgaa
cttcgccgttttgccaaagttataaattttggtattctttacggtatgagttcctacggt
ttggcggctcgtttgggaatagggcagcaggaggcgggagatattatcaataaatacttc
aaggcccttcctaaagtaaaagactacgttgaagaaagctataaagaagctagacaacgt
ggatatgccatgaccagtttcggcagaatacggccactcaacgaagtctctgtcaatccg
agagaccggggagccttgaagcgcatagccgtaaacactcccatacagggaacagcggct
gatattgcccgaatggctatgatcaagtttttccatcatttcgagggacgcaaaaacgtt
catctcgtattgcagattcatgactctcttgtgtgcgaatgcgctgcagaggaacgggaa
ggcatagaaaaagagcttgcaaatgtaatggaatctgcggctaaactttctgtgccattg
aaggtagagaccaagtggggaaaatccctcgctaatgtctag
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