Aminobacterium sp. MB27-C1: RBH88_04720
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Entry
RBH88_04720 CDS
T09908
Name
(GenBank) prephenate dehydrogenase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amiz
Aminobacterium sp. MB27-C1
Pathway
amiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBH88_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amiz03400
]
RBH88_04720
Enzymes [BR:
amiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBH88_04720
DNA repair and recombination proteins [BR:
amiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBH88_04720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Zn_ribbon_19
HVO_2753_ZBP
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
WMI72409
UniProt:
A0AA51GUF6
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Position
980250..982064
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AA seq
604 aa
AA seq
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MTLIDVVVPGPWWNSLSYEYEGDVKPGVRVLVPMGPSKRVGFSLGRSSGPSENKEIFRIR
SLIRPLDEETLFPNDLWLLSHWIGVNFLCGRGEALRVMSPSQLLKGEATEPIPPSGVEKL
NRSFTQNYYYFSEDEQRHKRYVDILRNNQGSAILLFPERALAELFYSLLETQGFEKVLLW
PSVGGKKLWEAWNKARIGDVNIIVGGPGAVFAPLCNPELILVDEESSPAYRLQSVPFLQI
RSVAVQRARIAKSSLYLCGRLPSSKIFLHKKPEEQLVSPEKRAFFVDTKFAPKPDFPGIS
SSFPLSESLVRETMKCLGEKRTALWILDRKGYAGEITCEECGGTLVCHSCGVALRAEEEA
VNVTCPLCGYKAPFPKKCPKCGGFLLSGKRPGLEIVLKIAQALCGEGYPVVEWHAEKNTS
KKRLREINAHFVHGGIVVGSRAALSLCDSMLVGMIGWIDADAEARKVVYRSKFDAYRMVL
ESFWRGREAAQRRVIIQSRRPGKGWQRGILEGWTSFWYKELKERQEYGFPPFSILAEITP
PPNKKEELLDYLVEKNIMAMDPGGKEKTLWIFVERPGKLKKVLEPWFNISKSREGFPLVS
LWID
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttgacgttgattgatgttgttgttcctgggccgtggtggaattctctatcgtatgagtat
gaaggggatgtgaagccgggtgttcgtgtacttgttcccatggggccttcaaaacgtgtg
ggtttttctcttggaaggtcatctggcccatcggaaaacaaagaaatattccgtattcgt
tcccttattcggccgttagatgaagaaactctatttccaaatgatctttggctgttgagt
cattggataggcgttaattttctgtgtggtcgaggagaggcattacgggtgatgtctccc
tctcaacttttaaagggagaagcgacagagcctatccccccttctggagtagaaaagctc
aatagatcctttacgcaaaattactattacttttcagaggatgaacaacgacataaaagg
tatgtagatatcttacggaataaccagggctcggctattttgctttttcctgaaagagct
ttagccgagcttttttattctcttttagagacacaagggtttgaaaaagtgctgctatgg
ccttctgttggtggcaaaaagctatgggaagcctggaacaaagctcgtatcggagatgtt
aatatcatagtaggtggtcctggtgctgtttttgcccctctatgtaacccggagcttata
cttgtagatgaagaaagtagccctgcataccgcctgcaatctgttccctttctgcagata
cgttcagtggctgtgcagagagcacgtatagcaaaaagttctttatatctttgtggtcga
ttaccttcatcgaaaatattccttcataaaaaaccggaggaacaactcgtttctccggag
aaaagagccttttttgtcgatacaaagtttgctcctaaacctgatttcccgggaataagc
tcttcttttccactaagtgagtctttggtacgagaaacgatgaaatgcttgggcgagaaa
agaacagctttatggattcttgatcgaaaagggtatgccggagaaattacatgtgaggag
tgcggtggcacacttgtttgtcattcatgtggagtggcattgagagcggaagaagaagca
gtaaatgtcacctgcccgctatgcgggtacaaggctcctttccctaaaaaatgtccaaaa
tgcggagggtttttacttagtggcaagcgtcctggactagagattgtattgaaaatagct
caggcactatgtggagagggctatccagtggtagaatggcatgcggaaaaaaatacaagc
aaaaaaagactgagagaaattaatgcgcattttgttcatggaggaatagttgttggctca
cgagcagctctttcactttgtgattctatgcttgttggcatgataggttggattgacgcc
gatgctgaggctcgtaaagtggtctatcggtcaaaatttgatgcatatcgtatggtactt
gaatctttctggcgtggaagagaagcggcgcaaagacgggttatcatacaatctcgaagg
ccaggaaagggttggcagagaggaattcttgagggatggacgtccttttggtataaagag
ctcaaagaacgacaagaatatggttttccaccctttagtattttagcagagattactccg
cctcctaacaagaaagaggagttattagactatcttgtagagaaaaatataatggctatg
gatccggggggtaaggagaaaactttatggatttttgttgagcgccccgggaagctaaag
aaagttcttgagccgtggtttaatatttcaaaatcgagagagggctttccgttggtctct
ctttggatcgattaa
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