Aminobacterium sp. MB27-C1: RBH88_05745
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Entry
RBH88_05745 CDS
T09908
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amiz
Aminobacterium sp. MB27-C1
Pathway
amiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBH88_05745 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amiz03400
]
RBH88_05745 (ruvB)
Enzymes [BR:
amiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBH88_05745 (ruvB)
DNA repair and recombination proteins [BR:
amiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBH88_05745 (ruvB)
RecFOR pathway proteins
RBH88_05745 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
NB-ARC
RNA_helicase
AAA_2
nSTAND3
DUF815
Parvo_NS1
AAA_24
AAA_14
AAA_18
IstB_IS21
TsaE
AAA_28
Cdc6_lid
AAA_17
Bac_DnaA
Sigma54_activ_2
AAA_PrkA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WMI72598
UniProt:
A0AA51CB93
LinkDB
All DBs
Position
1195526..1196584
Genome browser
AA seq
352 aa
AA seq
DB search
MSEEKASFFDLQNKTFEEEITLRPSTLQDFVGQQQLKDKLSIFVQAARQRKEALDHILFY
GPPGLGKTTLAGIIAHEMGGQLRVTTGPALEKAGDLAAILSNLEPYDVLFIDEIHRLPAN
VEEILYPSMEDFSLHIIVGKGPLANNICLSLPPFTLVGATTRLGLLTSPLRARFGIVEQL
KLYEEKEISDIVQRGAHVLGVKIEEEAAYEIARRSRGTPRVAIRLLKRVRDVAEVRQSSS
ITSSIASIALNMLGLDSLGLDDGDRRILHVIVELFDGGPVGLSTIAAALNEEGQTIEDIY
EPYLIQKGLIERTPRGRKATKNGYLYLGKNPPEDITKQLEFYQEEESDSCKE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaagaaaaggctagctttttcgaccttcagaataaaaccttcgaagaagaaata
acactccgcccttcaacattgcaagattttgttgggcaacaacaacttaaagataaactt
tcaatatttgtacaagctgctcgtcaaagaaaagaagcgcttgatcatattcttttttac
ggccctcccggtcttggtaagacaactcttgccgggattattgctcatgaaatgggtggt
cagcttcgtgtaaccactggtcctgcgctagaaaaagcaggagatcttgctgctattttg
tcaaatctcgaaccttacgacgttctttttattgatgaaattcaccgcttacctgcaaat
gtcgaagagattctttatccgagtatggaagattttagtctgcatattattgtgggaaaa
ggcccgcttgccaacaatatctgtctcagccttcctccctttacccttgttggggcaacg
acgcgccttggcctcttgacatcccctcttcgtgcacgattcggaatagtagaacagctc
aagctttatgaggaaaaagagatttcagatatagtccaaaggggcgcccatgttcttgga
gtcaaaatagaagaagaggctgcatacgaaatagcacgtcgttctcgaggtacaccacgt
gtggctatacgtttacttaaaagggttcgggatgttgctgaagttcgtcaatcatcctca
ataacctcatcgattgcatcgattgctcttaacatgcttgggctcgactctttggggcta
gatgatggtgaccgcagaattttacatgtgattgtagaactttttgatggaggaccagta
ggactttcaacgattgcggcagcattaaacgaagaaggacaaaccatagaagacatatac
gaaccatatcttattcaaaaaggtctcatagaaagaacacctcgaggtagaaaggcaact
aaaaatggatatttatatcttggaaagaaccctccagaggatattactaagcaattagaa
ttctaccaagaggaggaatcagactcatgcaaggaatag
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