Aminobacterium sp. MB27-C1: RBH88_08265
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Entry
RBH88_08265 CDS
T09908
Name
(GenBank) formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
amiz
Aminobacterium sp. MB27-C1
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RBH88_08265
Enzymes [BR:
amiz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
RBH88_08265
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Paralog
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
WMI70853
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Position
complement(1699488..1701860)
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AA seq
790 aa
AA seq
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MSISQRTEKIRKEYINSKPSISCLRAEIWTNSHKKTAGEPIAVRRAKAFAEACEKLPALI
FPEELLVGTPGEFRRTAILTPEFSWMWVDREMDSFDKRPQDPYVITEEQKNFLRKNVWPY
WKGNSLEETFLTRVPKDTAKILVDTGILDNDSKWRQAVGEVTPDYQDVLFPRGYRKIRDD
AERKLSLLKADSFSNIEKIDFYNSVIIACNGIMRLAERYSEMARTMALSEEDEIRKVELL
AISDVCKRVPAEPPRTFREACQFVWFVQLGGIISENPLALNLGRFDQYMYPFYKSDVEKG
QLNREKAQELIECLWLKLSEWVWTISSNTANYFAGYNQFQNLTVGGRKRDGSDGTNDLSY
ICLEATASVKTHQPGLSVRIHPDSPHKFVMAVAKLVSKGLGFPAIHNDRAGADMLLQAGY
DPEDARDWSNCGCVVPHFRKTGEWTSAVNVNFGAALEYALNEGKSRLTGEPLGLSEKPAR
EFKDFREVKEAFMRQLSYLVDHSVIGTVTAQKIHMEMVPRPFLSICVDGCLDKGTDLSKG
GAKYNIGPVLTGIGLGVVANSLAAIKKLVFDDKKTTMEEIFSALNSNWEGYENLREKALH
VPKYGNDDDYVDSLVTEISDFYYRETRRHKDILGSPFNSAFMGISNYVPTGKIVGALPCG
RRAKEPLTEGVSPFAGSDVTTPLAVMRSAAKVNHDVHAGGTLLNLRLNKELVSSDRGLRN
LGAMIQAYFSLGAFHVQFNTISTEELRKAQAKPEQYRDLLVRVAGYSTQFVNLSREMQDA
IIARTEHGSF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagtattagccaaaggactgagaaaattcgaaaggaatatattaatagcaaaccatct
attagttgtttacgagctgagatatggacaaactcccataagaaaacagcgggagaacca
atagcagtgcgaagggcaaaagcttttgctgaagcgtgtgaaaaactcccagctcttatt
tttcctgaagaactccttgtaggaaccccaggtgagttccgacgaacagctattttgact
ccagagttttcgtggatgtgggttgatagggagatggattcctttgataagcggcctcag
gatccttatgtcattacagaagagcagaaaaactttttacgaaaaaatgtatggccatat
tggaagggaaactctctggaagaaacttttcttacgcgggttccaaaagatacggccaaa
attcttgttgatacaggtattctcgacaacgactcaaaatggcgtcaagctgtgggagaa
gtcactcctgattatcaggatgtacttttccctcggggatatagaaaaatacgtgatgat
gcagaaagaaagctgtcgttgcttaaagccgattctttttcgaatatagaaaaaattgat
ttttataactctgtgattattgcctgtaatggcattatgcgcctggcggaacgatatagt
gagatggctagaacaatggctctttcagaagaagatgaaataagaaaggtcgaacttctt
gccatttctgatgtgtgcaagcgtgttccagcagaaccacctcgaacatttcgcgaggct
tgtcagttcgtatggtttgtgcaactcggcggtattatttctgaaaatcctctggcccta
aatctagggcgttttgatcaatacatgtaccctttttataaatctgatgtagaaaaaggc
cagttgaatagagaaaaagcacaagaattaattgaatgtctctggctcaagctttctgaa
tgggtgtggacaatttcttctaatacggctaattattttgcagggtacaatcagtttcaa
aatttgacagtaggaggacgtaaaagagacggaagtgacggaacaaatgatctctcttat
atttgtctagaagctacagccagtgtaaaaacgcaccaaccaggtttgagtgtaagaata
catccagattctccacataagtttgtaatggcagtagcaaagcttgtaagtaaaggatta
ggtttccccgctattcataacgacagagcaggagccgacatgcttttgcaagctggatac
gatcctgaagatgcacgagattggagcaattgtggctgtgtcgttcctcattttagaaaa
actggagaatggacctctgctgttaatgtaaatttcggagcggctttagaatatgcgcta
aatgagggaaagagtcgcctcacaggagaacctttaggtctttctgaaaaacctgccaga
gagtttaaagattttcgtgaggttaaagaggcttttatgcgacaactttcctatttggtc
gaccattccgtaattggaacagttacagcccagaaaattcatatggagatggttcctcgt
cccttcctctcaatttgtgtagatgggtgtctcgacaaggggacagatcttagcaaagga
ggagctaaatataatataggtcctgttcttacgggaattggcctaggtgttgttgcgaac
tctcttgctgcaataaaaaagctggtttttgatgacaagaaaactactatggaagagatc
ttttctgctttaaatagtaattgggaagggtacgaaaacttgcgagagaaagcacttcac
gttcctaaatatggaaacgatgacgactatgtagattcgcttgtgacagagatttctgat
ttctattatcgtgaaacccgtagacataaagatatattggggtccccctttaattcggct
tttatgggtatttccaactatgtccccacagggaaaattgtgggagctcttccatgtggc
agaagagcgaaagaacctcttacagaaggtgtttctccctttgccggaagcgatgtaacg
actccccttgcagtgatgcgttcagcagcgaaggtgaatcatgatgttcatgctggaggt
actcttcttaacttgagattgaataaagaattggttagttccgatagagggcttcgtaat
ttgggtgccatgatccaggcgtatttttccttaggggcttttcatgttcaatttaacaca
atttctacagaggaattaagaaaggctcaggcaaaaccagagcaatatcgcgatctgcta
gtaagagtggctggatatagcacccagtttgtcaatctttctcgggagatgcaagatgct
attatagctcgaacggaacatggatctttctaa
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