Aminobacterium sp. MB27-C1: RBH88_08695
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Entry
RBH88_08695 CDS
T09908
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amiz
Aminobacterium sp. MB27-C1
Pathway
amiz00061
Fatty acid biosynthesis
amiz00071
Fatty acid degradation
amiz01100
Metabolic pathways
amiz01212
Fatty acid metabolism
amiz02024
Quorum sensing
amiz04146
Peroxisome
Module
amiz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBH88_08695
00071 Fatty acid degradation
RBH88_08695
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBH88_08695
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBH88_08695
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amiz01004
]
RBH88_08695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amiz04147
]
RBH88_08695
Enzymes [BR:
amiz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBH88_08695
Lipid biosynthesis proteins [BR:
amiz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBH88_08695
Exosome [BR:
amiz04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBH88_08695
Exosomal proteins of breast cancer cells
RBH88_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WMI70933
UniProt:
A0AA51C862
LinkDB
All DBs
Position
complement(1785954..1787432)
Genome browser
AA seq
492 aa
AA seq
DB search
MGKNLSDVVGNLCLEAPDRDYIWWKDEWWSRKRFYDITSSVEKILTESGFSSGQRIVTLL
PNCPLLLALSVACWHLGGAIVPLNMLAGPQSLKRSIKHAEPFVIVVPDSIPLDMETLQKT
QIPVIPANIDGQMPSFKGVCQTPSNDDVAVLFYTSGTTGLPKAVPLSHENIYSNVEAAAL
HFSAFEADECVLLNALPNFHTLGYSTSGLLPLLKGARQAIVPSFMPPDRTLKAISAAKVN
FIVAVPAMIALLVAAAVRTNGNVPKHVSTIVSGGDRFPVALDARVKEYFGVNVMEGYGLT
ECSPVVAVNPDVTRRKIGTVGTLLPGFEYELRDENNNVISEGKEGILWLKGNSVVREYFR
DPENTSQKFHEGWFNTGDLVRIDDEGYITIIDRVSDIIIVGGFNVYPQEVEEILNNYPGI
KESAVVGIPHSISGQIVKAFIIRDDPAVTTKELMAYCRKQLAHYKVPRLYEFVEDFPRNS
LGKVLRRKLREG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatttgagtgatgttgttggtaatctttgcctcgaagctccggacagagat
tatatatggtggaaagacgaatggtggagtagaaaacgtttttatgatattacgtcatct
gttgaaaaaattctcacagaatcaggttttagttctggccagagaattgtaacattgctt
cctaattgtccccttctcttggctctttccgtcgcatgctggcatctggggggagcaatt
gttcccctgaatatgttagcagggccgcaatctcttaaacggagcataaagcatgcagaa
cccttcgttattgttgtaccagattctattcctttggatatggaaaccttgcaaaagacg
caaattccagtgattcctgcaaatatagatggacaaatgccttcttttaagggagtgtgt
cagactccctccaatgatgatgtagctgtcttattttatacttcaggtacaacaggttta
cccaaagcggttcctttgagtcacgagaatatttacagcaatgtggaagcggcagctctt
catttttctgcttttgaagctgacgaatgcgtactgctcaatgctttacctaatttccac
actctaggatattcaacaagcggacttttgcctcttttaaaaggtgcacgtcaagcgatt
gttccatcttttatgcctccagatagaacattaaaggctatttctgctgcgaaagttaat
ttcatagttgctgtaccggctatgattgctttattagtagctgcagcagtacgaacgaat
ggtaacgtgcctaaacatgtttctacgatagtgagtggtggggaccgtttcccagtggct
cttgatgctcgcgttaaagaatatttcggggttaatgttatggagggctacggattaacg
gaatgttctcctgtggttgctgtaaatcccgatgttacgaggcgaaaaataggtacggta
ggaacactattgccaggttttgaatatgaattgcgggatgaaaataacaatgttatctca
gaaggaaaagagggcattctctggttgaaggggaattcagtagttagagaatatttcaga
gatcctgaaaatacgtctcagaaatttcacgagggttggtttaatacaggagatttagtc
cgtattgatgatgaagggtatataactattattgatagagtaagcgatattatcatcgta
ggaggattcaatgtttaccctcaggaagttgaagaaattctgaataactatcccggcata
aaggagtcggctgtagtaggtattcctcactctataagcggtcagattgttaaggcgttt
attatacgagacgatcctgctgttacgacaaaagagttgatggcatattgcagaaaacag
cttgcccattacaaggttcctcgtctttatgagtttgtagaagattttcctcgtaacagt
ttaggaaaagttttgaggagaaaactgagagaaggataa
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