Aminobacterium sp. MB27-C1: RBH88_09555
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Entry
RBH88_09555 CDS
T09908
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amiz
Aminobacterium sp. MB27-C1
Brite
KEGG Orthology (KO) [BR:
amiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amiz03032
]
RBH88_09555 (gyrA)
03400 DNA repair and recombination proteins [BR:
amiz03400
]
RBH88_09555 (gyrA)
Enzymes [BR:
amiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBH88_09555 (gyrA)
DNA replication proteins [BR:
amiz03032
]
Prokaryotic type
DNA Topoisomerases
RBH88_09555 (gyrA)
DNA repair and recombination proteins [BR:
amiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBH88_09555 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WMI71086
UniProt:
A0AA51C8E2
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All DBs
Position
complement(1959817..1962270)
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AA seq
817 aa
AA seq
DB search
MEEKKGEPLFGKVLPLPLVEEIKHSYLDYAMSVIVGRALPDARDGLKPVQRRILYAMTEL
GLRHNTAYKKSARVVGETMGKYHPHGDSAIYDTMVRMAQNFSMRYPLVDGQGNFGSIDGD
PAAAMRYTEARLYEIGELMLADINENTVDWGPNFDESLEEPLCLPAMLPNLLINGSSGIA
VGMATNIPPHNLGEVIDALCYIIDVDPEHIDIGEILARLPGPDFPTGGVIIGRDGIIDAY
RTGRGKITMRGKTHVEEGKRGKTSVVITEIPYMVNKTNLIETIAKNVQDKTIDGVMDIRD
ESDRDGLRIVLEVNRDTDPNLVLRQLYRRTQLQSTFGAINLALVDGHPRELSIEEMLSIF
LDHRRSVVRRRTQFRLEKAQARAHIVEGLVKALDIIDAVIALIRGSSTTDEAKKGLVEKL
EFSELQAQAILDMRLQRLTGLEREKLEAELAQLLSDIERFQTILGNAKVLDTVIKDELLD
MKKRFGNERKTDIIDAVEDVSLEDLIPESDIVVVLSRDGYLKRKDLEEYSLQGRGGKGRK
GASLQEEDEIALVAVTSTHRDIYLFTSLGRVFALKGHMVPESKNGRGKLINRFVALEGEE
RVVTMHGRAVEGAEYAFFITKNGTAKRLDLSELKNLTRAGRRVLGLDEGDEIAEIVLTSG
DDHLLIVTAQGQALRVHESEFRPMGRMARGVRAMRLGQGDYVIGCDVVAEGRWPLLLSEK
GVGKRTRYEEFALRHRGGSGVIVMNLSEKTGMIVGCWSVAEDDEIMAITSRGRIIRLAVS
DTPVLGRTAMGSIIMRLDEGDILANASVVNTKEGEDE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaaaaggcgagcccctatttggaaaagtcctccctttacccttggtggag
gagataaagcatagctatcttgattatgcgatgagcgtcattgtagggcgggctctccca
gatgcccgagatgggctgaaacctgtacagagaagaatcctctatgccatgacggagttg
ggacttcgtcataatacggcgtataagaaatctgctcgtgtcgtcggagaaacgatgggt
aaatatcacccacatggtgactcggcaatctacgatactatggttcgaatggcccaaaat
ttcagcatgcgttatccccttgtcgatggacaaggtaactttggatctattgacggagat
cctgcggcagcaatgcgttatacagaagctcggttgtatgaaattggagagcttatgctt
gctgatataaatgaaaatacggtggattggggacctaatttcgacgaatcactcgaggaa
cccctttgccttccggcaatgctacccaaccttcttataaacggaagttcgggtattgct
gtaggaatggctaccaacattcctccccataatttgggagaagttattgatgctctttgt
tacattattgatgttgatccagagcatattgatataggagagatattagcaaggttacct
ggtcctgacttccctaccggcggcgtcataatcggcagagatggaatcatagatgcctat
cgtacgggacggggcaaaattacaatgcgtggcaagacccacgtagaagagggaaaaaga
ggtaaaacctctgtagtaatcacagaaattccctacatggtcaataagacgaatcttatt
gaaacaattgccaagaatgttcaggacaaaacgattgatggcgttatggacattcgtgat
gaatctgaccgtgacggccttcgaattgttcttgaagtcaatcgtgatacagatcctaat
ttggtcttgcggcagctttatcgtcgaacacaacttcagagcactttcggcgctattaat
ttagctttggtggacggtcatcctagagaactctctatagaagaaatgctttctattttc
cttgaccataggcgaagtgttgttcgtagacgaacacagtttcgtctggaaaaagcccag
gccagggcgcatattgttgaaggtctcgtaaaagcactcgatattattgatgcggttatc
gctcttattcgaggatcaagtaccactgatgaagccaagaaggggcttgtggagaaacta
gaattttcagaacttcaggctcaagctattcttgacatgcgcttgcagagacttactgga
ctggagcgagaaaaacttgaggctgagttagcccagcttttatcagatatagaacgcttc
cagacgattctggggaacgcgaaggttctcgatacagtcattaaagatgagttacttgat
atgaaaaaacgtttcggaaatgagcgaaaaacagacattatagatgctgtggaagatgtc
tctttagaagaccttatccctgaaagtgatattgttgttgtgctttcaagagatggatat
ctgaaacgtaaagatcttgaagagtactctctccagggaagagggggtaaaggaagaaag
ggagcttctttgcaagaagaagacgagatagctctggttgctgtgacaagtactcacaga
gatatctatctctttacctcgttgggtcgtgtctttgccttgaaaggtcatatggttcca
gaatcgaaaaacggacgtggtaagttaattaaccgctttgttgccttggaaggagaggaa
cgagtggtgaccatgcatggccgtgctgtagagggggcagaatatgccttcttcattacg
aaaaatggaacggctaagagacttgatctttccgaacttaaaaatctgacacgagctgga
cggagagttttaggacttgacgaaggcgatgaaatcgcagaaatcgtcttgacgtcggga
gacgatcacttgctcatagtaacggctcagggacaggcccttcgtgttcatgaatccgaa
ttccgacctatggggcgcatggccagaggcgttcgggctatgcgtttagggcagggagac
tacgttattgggtgtgatgtagttgccgaaggccgatggcctttgcttttaagcgaaaaa
ggggttggaaaacgaacgcgctacgaagagtttgctcttcggcatcgtggtggtagcggt
gttatcgtaatgaatctaagcgagaaaacaggaatgatagtaggttgctggagcgttgca
gaagatgacgagatcatggccattaccagcagaggtcgaattattcggctcgcagtttca
gacacgcctgttttgggaagaactgctatggggagtattatcatgagactggatgaaggc
gatattctagctaatgctagtgttgtaaatacaaaagagggcgaagacgagtaa
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