Alligator mississippiensis (American alligator): 102557709
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Entry
102557709 CDS
T03087
Symbol
THOC5
Name
(RefSeq) THO complex 5
KO
K13174
THO complex subunit 5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102557709 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102557709 (THOC5)
03041 Spliceosome [BR:
amj03041
]
102557709 (THOC5)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102557709 (THOC5)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102557709 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
102557709
NCBI-ProteinID:
XP_006265888
LinkDB
All DBs
Position
Un
AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGAAPDGKRSKADAEQDVKYYSEETEVDLRDPGKDYELYKQTCE
ELQRLMAEIQDLKSKGSKDSAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYKEAPPEISKPDITL
SDPHHQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQANAYGQACDKKLSVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDESVL
HLTFYYLMNLNVMTVKTKVTTAVEMTTPISAGDLLSPDSLLNCLYPGDHGKKTPNPANQF
QFDKVGILTLNDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMEMTMKLLR
TRLQSRLALHKQFASLEHGIVPVSSECQQLFPAKVVSRLVKWTAITYEDYLELSYTKDIV
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSSMPPVFSLCLTWKGERTNNNDDNIRA
MESEVSVFYKELSGPKPGYQLLTNQLQRLCVILDVYLETESHDNSVEGPKEFPQEKMCLR
LVRGPSRMKPFKFNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggactcgagtaagaagcggaagcccaaggtgatccgcacggacggcgccgcg
cccgacggcaagcgcagcaaggcggacgccgagcaggatgttaagtactatagtgaagag
acagaggtggatctaagagaccctggcaaagactatgaactctacaagcaaacttgcgag
gagcttcagaggctcatggcagaaatccaggatctgaagagtaaaggcagcaaagacagt
gctgctgagattgaggagcggcggatccagagctgtgtgcatttcatgactctgaagaaa
ctcaaccgtttggctcacatccggctgaagaaggggagagatcaaacccatgaggcaaag
cagaaggtagatgcctatcacctacagctccagaacctgttgtacgaagtcatgcacttg
caaaaggagatcaccaaatgcttggagtttaaatcaaaacatgaagaaattgagctggtg
agcgtggaggagttttacaaagaggctcccccggaaataagcaaacctgatatcaccctc
agtgatccccaccaccagacccttgcccgccttgactgggaattagaacagcgcaaaagg
ctggcagaaaagtataaggaatgtctaaccagcaaggagaaaatcctgaaggagattgag
gtgaagaaggaatatctgagtagcctccaacctcggctgaacagcatcatgcaggcctcc
ctccctgtccaggagtacctcttcatgccatttgaccaggcacacaagcagtacgagaca
gctagacatttgccaccacctctgtatgttctctttgtccaagccaatgcctatggccag
gcctgtgataagaagctgtctgtagcaattgaagggagtgtggaagaagccaaagccctc
tacaaacctccagaggattcccaagatgatgaaagtgactctgacgccgaggaggagcag
accacgaagcgccgccggcccacgctgggagtgcagctggatgacaagcgcaaggaaatg
ctgaagagacacccgctgtctgtcaccgttgacctgaagtgcaaagatgagagtgtgctg
cacctgaccttctattacctaatgaacctcaatgtcatgactgtgaaaaccaaggtgact
actgctgtggagatgactacgcccatcagcgctggagacctcctgtccccggattccctt
ctgaattgcctgtatcctggggatcatgggaagaagactcctaacccagccaaccagttc
cagtttgacaaagttggcatcctgactttgaatgactatgtgacagagctggggcatccc
tatgtctgggtgcagaagctgggaggcttgcatttccccaaagaccagccacagcacaca
gtgactgcagataactccctgagtgcaagccacatggagatgaccatgaagttgctccgg
acaaggctgcagtcccggctggctctccacaaacagtttgcttcactagaacatggcatt
gtgccagtctccagcgagtgccagcagctcttccctgccaaggttgtgtcacgcctggtg
aagtggacggcaatcacctatgaagattacctggagctgtcttacaccaaagacatcgtg
gaggctggcttggctgaagacacccacctttattacatggcactgatagaaagggggaca
gccaaactccaggcagctgttgtgctgaaccccggctactcctctatgccgcctgtcttt
agcctctgcctgacttggaaaggggaacggaccaacaacaatgatgacaacattcgggct
atggagagtgaggtcagtgtcttctacaaggagctgagtgggccaaagcctggctaccag
ctcctgaccaatcagctgcagcgcttgtgtgtcattctggatgtctacctggaaacagag
tcccatgacaacagcgtggagggccccaaggagttcccccaggagaagatgtgcctgcgg
ctcgtcagggggcccagccggatgaagccattcaagtttaaccatcctcagggcttcttc
agtcatcgctga
DBGET
integrated database retrieval system
