Alligator mississippiensis (American alligator): 102557914
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Entry
102557914 CDS
T03087
Symbol
COLGALT1
Name
(RefSeq) collagen beta(1-O)galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00310
Lysine degradation
amj00514
Other types of O-glycan biosynthesis
amj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102557914 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102557914 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amj01003
]
102557914 (COLGALT1)
Enzymes [BR:
amj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102557914 (COLGALT1)
Glycosyltransferases [BR:
amj01003
]
O-Glycan biosynthesis
O-linked Gal type
102557914 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
102557914
NCBI-ProteinID:
XP_006277129
LinkDB
All DBs
Position
Un
AA seq
503 aa
AA seq
DB search
MEEPRSYPDEEGPKHWSNSRYEYVMKLRQAALKSARDMWADYILFVDADNILTNPDTLSL
LMAENKTVIAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFL
IDLRKEASWDLTFYPPHPDYTWSFDDIIVFAFSCKQAEVQMFVCNKDVYGYLPVPLRSHS
TLRDEAESFMHAQLEVMVKNPPVEPSQYVSVPPKIPDKMGFDEVFMINLKHRTDRRDRML
QTLYEQQIECKIVEAVDGKAMNSSEVEALGIKMLPGYQDPYHGRPLTKGELGCFLSHYKI
WKEIVERGLEKSVVFEDDLRFEIFFKRRLMNLMYDLEDEGLDWDLIYIGRKRMQVEHPEK
SVPHVRNLVEADYSYWTLAYVISLQGAQKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKK
HFENRNLLAFSVEPLLIYPTHYTGDDGYISDTETSVVWNNEKVKTDWDRAKSQKMKEQQE
LKNEARNSDVLQSPLDSAARDEL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccaggtcatacccggatgaggaaggcccaaagcactggtcaaattctcgc
tatgagtatgtgatgaagctcagacaggcagccttgaaatctgcccgggacatgtgggct
gactacatcctgtttgtggatgcagataatatcctgacaaacccagacactctgagcctg
ctgatggcggagaataagacggtgatagcacctatgctagattctcgtgctgcctattct
aacttctggtgtgggatgacctcacagggttattacaaacgtactcctgcctacattcct
attcggaagcgggatcgtcgtggttgctttgctgtccccatggtgcattccaccttcctg
atcgacctgagaaaggaggcctcctgggatctcaccttctaccctccacacccagactac
acctggtcctttgacgatatcattgtctttgcattttcctgtaagcaggcagaagtccag
atgtttgtgtgcaacaaggacgtttatggctacctgccagtacctctgagatcccacagc
actcttcgggacgaggcggagagcttcatgcatgcgcagctggaggtcatggtgaagaac
cctccagtggaaccttcgcaatatgtgtcggtcccgcccaagatacctgataagatgggt
tttgatgaggtgttcatgattaatctgaagcaccggacagaccgacgtgaccgaatgctg
cagacgctatatgagcagcagatagagtgcaaaattgttgaggctgtggatggaaaagct
atgaacagcagtgaggtggaggctttggggattaaaatgcttccaggttatcaggatcca
taccatggccgtccactcactaaaggggagctgggatgttttcttagtcactacaagatc
tggaaggagattgtggagagagggctggagaaatcagtcgtgtttgaggatgacctgcgt
tttgagattttctttaagcgacgtttgatgaacctaatgtacgacttggaagacgagggc
ctagattgggacctgatctacattgggagaaagcgaatgcaagtggagcacccagagaag
tctgtgcctcatgtgagaaacctagtggaagctgattattcctactggactctggcctat
gtgatttcactgcagggcgcccagaagctgctggcagctgagccgctgtctaaaatgtta
ccggtggatgaattccttcctgtcatgtttgacaagcatcctgtatctgagtacaagaag
cattttgaaaaccggaatttgctggccttttcagtggaaccacttctgatttaccccaca
cattacactggtgacgatggttatataagtgataccgagacctcggtggtttggaataat
gagaaagtaaaaactgactgggaccgtgccaaatctcaaaaaatgaaagagcaacaagag
ctgaaaaatgaggccaggaactcagatgtgctccagtctcctcttgacagtgcagcccgg
gatgaactatga
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