Alligator mississippiensis (American alligator): 102558034
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Entry
102558034 CDS
T03087
Symbol
PYM1, WIBG
Name
(RefSeq) PYM homolog 1, exon junction complex associated factor
KO
K14294
partner of Y14 and mago
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102558034 (PYM1)
03015 mRNA surveillance pathway
102558034 (PYM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102558034 (PYM1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102558034 (PYM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago-bind
CDGP
Motif
Other DBs
NCBI-GeneID:
102558034
NCBI-ProteinID:
XP_006267757
UniProt:
A0A151LZE7
LinkDB
All DBs
Position
Un
AA seq
210 aa
AA seq
DB search
MATPYVTDETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELPPG
LSPEANAQPGRPAPRAESGEVGLSKTAKRNLKRKEKRKQQQEKGEKDTDELIQVLEKTTL
SGGGAGDRGLPAPPQPLACGAKAPGDGEALAAVAEKTKKIKNLRKKLRQVEELQQRVDSG
EIKQPSREQLEKLARRKALEEELEDLELDL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccctatgtgacggacgagaccgggaagtacatcgcgtccacgcagcgcccg
gatggcacctggcggaagcagcggcgggtgaaggagggctacgtgccgcaggaggaggtg
cccgtgtacgagaacaagtatgtgaaattcttcaagagcaaacccgagctgcctcccggg
ctgagccccgaggccaacgcgcagcccgggcggccggcgccacgggccgagagcggcgag
gttgggctctctaagacggccaagaggaacctgaagcgcaaggagaagaggaagcagcag
caggagaaaggggagaaggacacagatgaactgatccaggtgctggagaagaccacactc
tcggggggtggtgctggggaccggggcctacctgccccaccacagccgctggcctgcggt
gccaaggcccccggggacggggaggccttagccgccgtggcggagaagacgaagaagatc
aaaaacctgcggaagaagctgcggcaggtggaggagctgcagcagcgtgtggactctggg
gagatcaagcagccaagccgggagcagctggagaagctggcacggcggaaagcgctggag
gaggagctcgaggacttggagctggacttgtag
DBGET
integrated database retrieval system
