Alligator mississippiensis (American alligator): 102558064
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Entry
102558064 CDS
T03087
Symbol
DENND4C
Name
(RefSeq) DENN domain containing 4C
KO
K20163
DENN domain-containing protein 4
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102558064 (DENND4C)
Membrane trafficking [BR:
amj04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102558064 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
102558064
NCBI-ProteinID:
XP_019339203
LinkDB
All DBs
Position
Un
AA seq
1861 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTSTLLDQEISRCETKSTGPKAPITDIAVIIKSAGETVPEG
YTCVESTPTALQANLNYGSLKSPELFLCYKRGWDKPPLTDIGYRHWWGSSVYLCYKKSVP
ASNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGATIECWDPQTKYPLPVFSTFVLT
GSSAEKVYGAAIQFYEPCSRELLTEKQQLQLSLLTAVERKVVTAKSINSNKCICLLSHWP
FFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNISFPSPQRPRILVQLSAHDALILSQ
PVSTPLPLSGANFSTLLMNLGPENCATVLLFVLLEGKILLHSLRPAVLTGVAEAVVAMIF
PFQWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLYDPPQDVVCIDLDTNMVYISDDK
KSMNWKQLPKKPCKILLSTLKKLHPQLASVHRKTQEGSAVEMTPIEADFSWQKKMTELEM
EIQEAFLRFMASILKGYRPFLKPITQAPSNKATAADSLFDHQGFLKSRDRAYTKFYALLT
KTQIFSRFIEECSFVSDKDTGLAFFDDCTEKVDVDSAEDTRLIELDESQKSEHTVFIMPP
EPPPEDGQDWAPKYSYKNFPRLDLKIFDRPQELKLSFNRHPAGGSISNSPALMAKRTKQE
IKTAHKLAKRYYTNPPQWAKCLFSHCYSLWFICLPAYVRVAHPKVKALQQAYDVLIKMRK
TDVEPLDEVCYRVVMQLCGLWGHPVQAVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPS
SNRSGIFLWTKVRNVVRGMARFRQCLKKATRSSHVPVIPAPRNAMGGSDGDTVSHGSVDS
SNDANNGEHTLFVRDLVRLDSIDNHSSTGGQSDQGYGSKDELVREDGYSLHANGTLMGKK
SSKTEDLTEEVCAADDSGEKQQLSTEPHSLTEPPTWGNSIVKVPSGIFDGTGRKSSGGTA
SIPPFIAQDSIEGSVFDDASPKKTSEKGQKRQKLFSERSCSFSSESRAGMLLKKGSLDLI
SSEIAIMMGADAKILTAALSGAKTSPTHTSKSLNFDSMGDQQVPALSGNRTYMSKGTWEL
EHRSSPVMEEPEEGPEHLENGGDDNADKAEDHLTKLLAGNQSTNGKMEPKDAANKRNSLY
GVVKPVEREDVEVGSDPLSLLATESIKPKCSETEEKTMPVVSRYLADEIESYMNLKSPVG
SKFPSMEVHKEESRETTVSSTLDHSQDKRSSLPSDSIPRVPKQHENRKSPSVSRSKTFAG
RPKQPFRSRVQKERSSSVTGLGHSPQHGSLGSVVTTLSSLKLDNILSGPKIDILKSGMKQ
AANVASKMWGAVASAYNYSEDEEETHLQDFPFPIGLEDHLLGDNLSPKTGILGLVTSELT
QSTTSLGSSNSSGDVGKQQYLTGEISFPRSMKGLDSEKSEHGSSHNTSLSSIFQNCAMEV
LMSSCSQCRACEALVYDEEIMAGWTADDSNLNTTCPFCKSTFLPLLNVEFKDFRGSASFF
LKPSISGDSLHSGNIPITTDPLELKPASSSAVADLMSFSDHPNSNEIIVEETSSTPEQSN
MPEEQSKGPRAVTTSGNNPPKPGASLTRSHSVGGPLQNIDLSQRPSHGISTVSLPNSLQE
VVDPLRKRPNPLPVSVPYLSPLVLRKELESLLENEGEQVIHTSTFINQHPIIFWNLVWYF
RRLDLPSNLPGLILTSEHCNEGVQLPLSSLSQDSKLVYIQLLWDNINLYQEPGEPLYISW
RNLNSVEKKPSTTSEDQQAISTLLENVKLSIQHNNVLKPINFLLQKVQPGVKRQRSFYRE
ILFLSLVSLGRQNIDIEAFDSEYRIAYKGLASDVLEKMQKIDAPPGSRVEWCRKCFGAPL
I
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccaagggtggctgactactttgtggtggcaggactgactgac
acttcaactcttctggaccaagaaataagccgctgcgaaacaaagtcaaccggtccaaag
gctccaattacagacattgctgtcattatcaagtcagctggtgaaactgtccctgagggt
tacacctgtgttgaatccacccccacagcccttcaagccaacttgaactacggcagtctt
aaaagtccagagctttttctttgctacaagaggggctgggacaaaccacctcttacagac
attggttacagacattggtgggggtccagtgtgtacctttgttacaaaaagtctgtgcca
gcttccaactcaatagcatataaagctggcttgattttcagatatccagaggaggattat
gagtcattcccattgtcagaatctgttcctctattttgccttccaatgggagctactatt
gaatgctgggatcctcaaaccaaatatccactaccagtgttctcaacatttgtactgact
ggttcttctgcagaaaaggtctatggtgcagctattcagttttatgagccttgttcccgg
gagctgctaacagaaaagcagcaattgcagctgagcctcctgacagctgtggagagaaaa
gtggttactgccaagtccatcaattccaacaaatgtatctgccttctctcacattggcct
ttctttgaagcctttcgaaaatttcttatgttcatctacaagctttctgtttctgggcct
catcctcttcccattgaaaagcatatatcccactttatgcataatatatcttttccttca
cctcaaaggccaaggatccttgtgcagctttctgcccatgatgcattaatactgtctcag
ccagtttctacacctttaccactcagtggagcaaacttcagcaccctcctaatgaatctt
ggaccagaaaactgtgctactgtgctactctttgtactcttagaaggcaagatcctacta
cactcccttagaccagctgtgctaacaggtgtagctgaagctgtagtagctatgatattt
ccatttcagtggcaatgtccatacatccccctctgtcctttgtctctggcaacggtgctc
agtgctcctgttccatttatagttggagttgattcacgatactttgatctgtatgatcca
ccacaggatgttgtttgcattgacttagacacaaacatggtgtacatttcagatgataag
aagagtatgaactggaagcagcttcctaagaagccgtgcaaaattctgttgagcacttta
aagaaactacatccacagttagcatcagttcacagaaagacacaagaaggttctgcagtg
gaaatgactcctatagaggcagatttctcttggcagaagaagatgacagaacttgagatg
gaaattcaggaggctttcctacgctttatggcatctattttaaaggggtacagaccattc
ctcaagccgatcacacaggcaccttcaaataaagctactgctgctgattccttgtttgac
catcaagggtttttaaaaagtagggaccgtgcctacacaaaattctatgcacttctaacg
aaaacacagatatttagccgcttcatagaagagtgcagttttgtgagtgacaaggacact
ggcttggcattttttgatgactgcacagaaaaggttgatgttgactctgcagaggacaca
cggttgattgagcttgatgagtcacagaagagtgaacacacagtgtttataatgccacca
gaacctccccctgaagatggacaggactgggcccctaagtacagctataaaaacttccca
agactagacttgaagatatttgacaggccacaggagctcaaactttctttcaacagacac
ccagctggaggcagcatttcaaatagcccagcactcatggcaaagagaacaaaacaggag
ataaaaacagcccataaattagccaagaggtattatacaaaccccccacagtgggccaag
tgtctcttcagtcattgttacagtctatggtttatttgtctgccagcctatgtcagagtt
gcccatcctaaggtcaaagcactgcagcaggcatacgatgttctcattaaaatgaggaaa
actgacgtggaaccacttgatgaggtatgctatagagttgtaatgcagctgtgcggactt
tggggccatcctgttcaggcagtgagagtcctttttgaaatgaaaaatgctggaatacaa
ccaaatgcaatcacctatggttattataacaaggcagttctggagagcccatggcccagc
agtaaccgcagtggtatatttctgtggacgaaggtacggaatgtggtccgtggcatggca
cgatttaggcagtgcctaaaaaaagcaacacgaagttcacatgtcccagtgataccagct
ccacggaatgccatgggtggaagtgatggggacacggtgagccatggtagcgtggatagt
tctaatgatgctaacaatggggagcacacactcttcgtcagagacttagtcaggcttgat
tccattgataatcactctagcacaggtggtcagtcagaccagggatatggatccaaggat
gaacttgtacgggaggatggatatagccttcatgcaaatgggacactaatgggaaaaaaa
tcttctaaaactgaagacttgacagaagaggtctgcgctgcggatgactctggtgaaaag
cagcagctgagtacagaacctcacagtctgacagagccacccacctggggaaacagtatt
gtgaaagttccatctggcatttttgatggcactggcagaaaaagcagtggtggaactgca
tctatcccacccttcatagctcaggattccattgaaggttcagtctttgatgatgcttct
cccaagaaaacaagtgaaaaaggacagaagagacagaaacttttttcagagaggagctgc
agttttagcagtgaaagcagagcaggtatgctgttgaagaaaggcagtttggacttgatt
tctagtgaaattgcaataatgatgggagcagatgccaagattctcacagctgctttatct
ggggccaaaacatcacccacacatactagtaaatcccttaactttgacagtatgggtgac
cagcaggtccctgcgctgagtggcaataggacttatatgagtaaaggtacttgggaattg
gaacataggtcctcaccagtgatggaggagcctgaggaagggccagagcaccttgagaat
ggaggtgatgacaatgcagacaaagcagaagaccaccttaccaaactgctggctggtaat
cagtccacaaatgggaaaatggaacccaaagatgcagcaaataaaaggaatagcttgtat
ggagttgttaagcctgtagaaagggaagatgttgaagtgggctcagatcctttatctctg
ctggctactgaaagcataaagccaaaatgctcagagactgaagaaaagacaatgccagtt
gtatcgcgttatctggctgatgaaatagaaagctacatgaacctgaaaagccctgttggt
agcaaatttcccagcatggaggtacacaaggaagagagcagagaaacaacagtatctagt
acacttgatcactcccaagacaagagatcaagcctaccttcagattcaattccacgagtt
ccaaagcaacatgaaaataggaagagcccttcagtttccaggtccaaaacctttgccggg
cgaccaaagcaaccgttccgttcacgagtgcagaaggagcggtcttcatctgtaacgggg
ctgggtcattctcctcagcatggctcactgggatctgtggttacaactttatccagtctg
aagttagataacatactttctggaccgaaaatagacattctgaagtcaggcatgaaacaa
gcagctaatgtagccagtaagatgtggggagctgtagcctcagcctacaactactcagaa
gatgaggaagaaactcatctacaagacttcccctttcccattggattagaagaccacctt
ttaggagacaacctgtcaccaaaaacaggaatcctggggctggtaaccagtgagctcaca
cagagcactaccagtctaggtagcagcaacagcagtggagatgtaggaaaacagcaatac
ctaacaggtgaaatttcattcccaagaagcatgaaaggtctggattctgagaagtcagaa
catggctcctcccacaataccagtttatctagcatcttccagaactgtgcaatggaggtg
ttgatgtcaagttgctctcagtgtcgggcatgtgaagctttagtttacgatgaagaaatt
atggctggatggactgcagatgattccaacttgaacaccacttgtcccttctgtaaaagc
actttcttacctcttcttaatgtggaatttaaagactttcgtggctctgctagctttttt
ctgaaaccaagtatctctggagatagcttacacagtggtaacattccaataactactgat
cctctggagctgaaacctgcatccagctctgctgttgctgatttgatgagtttttcagat
catccaaactccaatgagatcatagttgaagaaacaagctctacacctgagcagagtaat
atgcctgaagaacagagtaagggccccagagcagtgacaacatctggcaacaatccacca
aaaccaggagcatctttgactcggagccatagtgtggggggccccctgcaaaatattgat
ctgtcacagagaccatctcatggaatttcaacagttagccttccaaacagcttgcaagaa
gttgtggatcccttaagaaaaaggcccaatcctcttcccgtttctgtaccttatttgagt
cctctggtgctgcgtaaagagcttgaatccttgttggagaatgaaggggaacaagtgata
catacatccacattcatcaaccagcaccccatcattttctggaacttggtttggtatttc
cggcgcttggatctacctagcaacttgcctgggctcattttaacctcagaacattgtaac
gagggagtgcagcttcctctgtcatctctgtcacaagatagcaagttagtgtacattcag
ctactgtgggacaacatcaatctctatcaggagccaggagagcctctgtatatatcctgg
agaaatctgaactcagtggagaagaaaccatccacaacttcagaagaccagcaggcaata
agcactttgttagagaacgtcaaactaagtattcaacacaataatgttcttaaaccaatc
aacttccttctgcagaaagttcaaccaggtgtcaaaagacaaagaagtttttaccgagaa
atcctgttcctgtctttggtgtcccttggcagacagaacatcgacattgaggcctttgac
agtgagtacagaattgcatataaaggtctagcttcagatgtgcttgaaaagatgcagaaa
atagatgcacctccaggcagcagggtagagtggtgcagaaaatgttttggagcccctctc
atttaa
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integrated database retrieval system
