KEGG   Alligator mississippiensis (American alligator): 102558202
Entry
102558202         CDS       T03087                                 
Symbol
PNKP
Name
(RefSeq) polynucleotide kinase 3'-phosphatase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102558202 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amj01009]
    102558202 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amj03400]
    102558202 (PNKP)
Enzymes [BR:amj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102558202 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102558202 (PNKP)
Protein phosphatases and associated proteins [BR:amj01009]
 HAD phosphatases
  Other HAD phosphatases
   102558202 (PNKP)
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102558202 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase Hydrolase_6 HAD_PNKP
Other DBs
NCBI-GeneID: 102558202
NCBI-ProteinID: XP_006274927
LinkDB
Position
Un
AA seq 593 aa
MERQGEMGLEVPSLTSCPVPLLPPAAMACHLVSQDGKHDPVPLPNGIAVVLGRGPETRVA
DKKCSRKQVELLADYKQQAVRVTQLGVNPTSVDNQELGQGKSATLREGQTLWLVNRSYPH
GLRFLALAHSPHKTLLDFFSSKRQPQLEGDKDEDEEHPHKRLKAPSPSEEDEEEDDIVAT
KLHQLQDTAAQAQGAKSGAAPQPLGGSWSLPPHPQDSWEQHSKLLVFTKEGVMPSTKVAG
FDLDGTIITTQSGKVFPTSPDDWRILYPEVPQKLKQLQREGYKIIIFTNQLGISRGRLRP
EVFKAKAEAVVEQLGLPIQLLVATGTGIYRKPVLGMWEHLCQKANGGLSVSIQHSLYVGD
AAGRPPNWAPGHKKKDFSCSDRLFALNAALPFHTPEEFFLGWAPAPFQLPAFDPRHLDPD
GPLYDPPNALLVWPTPELVVAVGFPAAGKSTFLKRHLVPAGYAYANRDTLGSWQKCVAAC
TAALRQGKSAAVDNTNPDLESRRRYIECAQDAGVPCRCFLFMASLEQAKHNNRFRDMTET
GHVSVTDVVLNTYKSKFVAPALSEGFSQILQVHFVPRFPDARLAALYRQFSDG
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggagaggcagggggagatgggactggaggtgccatccctcacctcctgcccagtgcct
ctccttccacctgcagccatggcttgccaccttgtgagccaggacgggaagcacgacccc
gtgcccctgcccaacggcattgccgtggtgctgggccgtggccccgagacccgtgtggcc
gacaagaagtgctcccggaagcaagtggagctgctggctgactacaaacagcaggcagtg
agagtcactcagctgggtgtaaatcccacctcagtggacaaccaggagctggggcagggc
aagagcgccaccctgagggaggggcagacactatggctggtaaaccgcagctacccccat
ggcctgcgcttcctggccctggcccactccccccacaagaccctgctggacttcttcagc
tccaagcgccagccccagctagagggggacaaagatgaggatgaggagcatccccacaag
agactgaaggctcccagcccctctgaggaggatgaggaggaggatgatattgtagccacc
aaactgcatcagctgcaggacacagctgcccaggcccagggagcaaagagtggggctgcc
ccccaacccttgggggggtcctggagcctgcccccccacccccaggactcctgggagcaa
cacagcaagctgctggtattcactaaggagggtgtcatgcccagcaccaaggttgctggg
tttgacctggatggaaccatcatcaccactcagtcaggaaaggttttccctaccagtccg
gacgactggaggatcctgtaccctgaggtcccccagaagctgaagcaactgcagagagaa
gggtataagatcatcatcttcaccaaccagctggggatcagccgaggccgcctgcgcccc
gaagtcttcaaggccaaagcggaggcagtggtggagcagctggggctgcccatacagctg
ctggttgccactggtactgggatctaccggaagcctgtgctgggcatgtgggaacatctg
tgccaaaaggcaaacgggggcctgtctgtatccatacagcacagcctgtatgtgggagat
gcagccggacgccccccgaactgggcccctgggcacaagaagaaggatttctcctgcagt
gaccgcctgtttgccctgaatgcagcactgccattccatacccccgaggagttcttcctg
ggttgggcacctgcccccttccagctgcctgccttcgacccgaggcacctggatcctgat
gggcccctttatgacccacccaacgccctcttggtatggcccacacccgagctggtggtg
gctgttggcttccctgcagctggcaagtcaaccttcctgaagcgtcacctagtgcctgct
ggctatgcgtacgccaaccgggatacactgggctcctggcagaagtgcgtggcagcctgc
acagcagcactgcgccagggcaagagcgcagccgtggacaacaccaaccctgacctggag
tcacgtcgcaggtacattgaatgtgcccaggatgccggggttccctgccgttgcttcctc
ttcatggcctccttggagcaggccaaacacaacaacaggttccgggacatgacagaaaca
gggcatgtctctgtcaccgatgttgtcctcaacacctacaagagcaagttcgtggcgcca
gcactgagcgagggcttctcccagatcctgcaggtgcactttgtaccgcgtttccctgat
gcccgcctggctgcactgtaccgccagttctctgacggctga

DBGET integrated database retrieval system