Alligator mississippiensis (American alligator): 102558261
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Entry
102558261 CDS
T03087
Symbol
TRIO
Name
(RefSeq) trio Rho guanine nucleotide exchange factor
KO
K08810
triple functional domain protein [EC:
2.7.11.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102558261 (TRIO)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amj01001
]
102558261 (TRIO)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102558261 (TRIO)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102558261 (TRIO)
Protein kinases [BR:
amj01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
102558261 (TRIO)
Membrane trafficking [BR:
amj04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102558261 (TRIO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3-RhoG_link
RhoGEF
Pkinase
SOS1_NGEF_PH
SH3_KALRN
Spectrin_6
Spectrin
PK_Tyr_Ser-Thr
I-set
PH
Ig_3
SH3_1
CRAL_TRIO_2
SH3_2
ig
PH_10
CRAL_TRIO
Spectrin_SESTD1
SH3_9
Ig_2
IQ_SEC7_PH
PH_19
V-set
PH_13
RHG20_PH
DUF7799
Motif
Other DBs
NCBI-GeneID:
102558261
NCBI-ProteinID:
XP_006266378
LinkDB
All DBs
Position
Un
AA seq
3084 aa
AA seq
DB search
MSSSATTASTTSSCSSAGEAAEEAAKDSADIAAFFRAGFRKNDEMKAMEVLPILKEKVAY
LSGGRDKRGGPILTFPARSNHDRIRQEDLRRLISYLACIPSEEVCKRGFTVIVDMRGSKW
DSIKPLLKILQESFPCCIHVALIIKPDNFWQKQRTNFGSSKFEFETNMVSLEGLTKVVDP
SQLTPEFDGCLEYNHEEWIEIRVAFEDYISSATHMLSRLEELQDILSKKELPQDLEGARN
MIEEHSQLKKKVIKAPIEDLDVEGQKLLQRIQSSESFPKKNSGSGNADLQNLLPKVSTML
DRLHSTRQHLHQMWHVRKVKLDQCFQLRLFEQDAEKMFDWITHNKGLFLNSYTEIGTSHP
HAMELQTQHNHFAMNCMNVYVNINRIMSVANRLVESGHYASQQIKQIAGQLEQEWKAFAA
ALDERSTLLDMSSIFHQKAEQYMSNVDSWCKACGEVELPSELQDLEDAIHHHQGIYEHIT
LAYSEVSQDGKSLLDKLQRPLTPGSSDSLTASANYSKAVHHVLDVIHEVLHHQRQLENIW
QHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHEDFEE
VAQNTYTNADKLLEAAEQLAQTGECDPEEIYQAAHQLEDRIQDFVRRVEQRKILLDMSVS
FHTHVKELWTWLEELQKELLDDVYAESVEAVQDLIKRFGQQQQTTLQVTVNVIKEGEDLI
QQLRDSAISSNKTPHNSSISHIETVLQQLDEAQSQMEELFQERKIKLELFLQLRIFERDA
IDIISDLESWNDELSQQMNDFDTEDLTIAEQRLQHHADKALTMNNLTFDVIHQGQDLLQY
VNEVQASGVELLCDRDVDMATRVQDLLEFLHEKQQELDLAAEQHRKHLEQCVQLRHLQAE
VKQVLGWIRNGESMLNAGLITASSLQEAEQLQREHEQFQHAIEKTHQSALQVQQKAEAML
QANHYDMDMIRECAEKVASHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYK
REEDWCGGADKLGPNSETDHVTPMISKHLEQKEAFLKACTLARRNADVFLKYLHRNSVNM
PGMVTHIKAPEQQVKNILNELFQRENRVLHYWTMRKRRLDQCQQYVVFERSAKQALEWIH
DNGEFYLSTHTSTGSSIQHTQELLKEHEEFQITAKQTKERVKLLIQLADGFCEKGHAHAA
EIKKCVTAVDKRYRDFSLRMEKYRTCLEKALGISSDSNKSSKSLQLDIIPASVPGSEVKL
RDAAHELNEEKRKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGILN
KEHIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSTQ
LILEHAGAYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKDGLE
VMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMS
LVFSKEVKDSSGRSKYIYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASS
IENKQDWIKHIREVIQERTIHLKGALKEPIHIPKTAPTTKQKGRRDGEDLDSQGEGSSQP
DTISIASRTSQNTLDSDKLSGGCELTVVIHDFTACNSNELTIRRGQTVEVLERPHDKPDW
CLVRTTDRSPAAEGLVPCGSLCIAHSRSSMEMEGIFNHKDSLSVSSNDASPPASVTSLQP
HMIGAQSSPGPKRPGNTLRKWLTSPVRRLSSGKADGHVKKLAHKHKKSREVRKSADAGSQ
KDSDDSAATPQDETTEERGRNEGLSSGTLSKSSSSGMQSCGEEEGEEGADAVPLPPPMAI
QQHSLLQPDSQDDKTSSRLLVRPTSSETPSAAELVSAIEELVKSKMALEDRPSSLLVDQG
DSSSPSFNPSDNSLLSSSSPIDEMEERKSSSLKRRHYVLQELVETERDYVRDLGCVVEGY
MALMKEDGVPDDMKGKDKIVFGNIHQIYDWHRDFFLGELEKCLEDPEKLGSLFVKHERRL
HMYIVYCQNKPRSEHIVSEYIDTFFEDLKQRLGHRLQLTDLLIKPVQRIMKYQLLLKDFL
KYSKKANLDTTELERAVEVMCIVPKRCNDMMNVGRLQGFDGKIVAQGKLLLQDTFLVTDQ
DTGLLPRCKERRVFLFEQIVIFSEPLDKKKGFSMPGFLFKNSIKVNCLSLEENVDNDPCK
FALTSRTGDVTETFVLHSASPGVRQLWIHEINQILENQRNFLNALTSPIEYQRNHSSGGG
GSSGSGAGGGCGGGSSSSNSSGPSSCSGITSSSRSRPSRIPQPVRHHSPVLVSSAASAQA
EADKMSGMSIPNPSLPLHSTSLETGLSQVDRHPLSTELDGPRRETEQIPKMKVIESPRKT
AGSVSGSADGAQKELRGSMEDNRSRSSIGSLTLGKSRPGAISPLNSPLSTTFPSPFGKET
FPPSSPLQKGSFWSSIPASPASRPGSFTFPGDSDSLQRPVHHHSSHSKDTDRMSTCSSTS
EQSIHSTQSNGSESSSSSNISTMLVTHDYTAVKEDEINVYQGEVVQILASNQQNMFLVFR
AATEQCPAAEGWIPGYVLGHTSAVIIDNPDGTIKKSTSWHTALRLRKKSEKKDKGGKREG
KLENGYRKSREGLATKVSVKLLNPNYIYDVPPEFIIPLSEVTCETGETIMLRCKVCGRPK
ASVTWKGPDHNTLNNDGHYSISYSDLGEASLKIIGVTTEDDGIYTCIAANDMGSVSSSAS
LRVLGPGSDGIMVIWKDNFDSLYSEVAELGRGRFSVVKKCDQKGTKRVVATKFINKKLMK
RDQVTHELGIMQNLQHPQLIGLLDTFETSTSYVLVLEMADQGRLLDYVVRWGNLTEGKIR
LYLEEILEAIQYLHNCRIAHLDLKPENVLVDQSSAKPTIKLADFGDAVQLGTTYYIHQLL
GNPEFAAPEIILGNPVSLTSDVWSIGVLTYVLLSGVSPFLDESVEETCLNICRLDFSFPD
DYFKGVSQKAKDFVCFLLQDDPVKRPSAAVGLQEPWLQLGNSKSADSIDTSRLTSFIERR
KHQNDVRPIRSIKNFLQSRLLPRV
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcggccaccaccgcctccaccaccagtagctgcagcagcgccggggaagcg
gccgaggaggcagccaaggactccgcagacatcgcggcgtttttccgagccgggtttcgc
aaaaatgatgaaatgaaggctatggaagtattgccaatcttaaaggaaaaagttgcatac
ctgtcaggtggcagagacaagcgtggaggccccattctaacctttccagctcgcagtaac
catgatagaatacggcaagaggaccttaggagactaatttcatacctagcttgtatacct
agtgaagaagtatgtaaacgaggattcacagtgattgttgacatgcgtggatctaaatgg
gactctataaagcctctgctgaagattttacaggaatctttcccctgttgtattcatgtt
gcactgataatcaagccagacaatttctggcagaaacagaggacaaactttggtagctct
aagtttgagtttgagactaatatggtatctctggaaggccttaccaaagtagttgaccct
tctcagctaactccagaatttgatggctgcttggaatataaccacgaggaatggattgaa
atcagagttgcctttgaggactacattagcagtgcaacccacatgctctcacgattagag
gaactgcaggatatactctcaaaaaaagaattgcctcaggacttggagggtgctcgaaat
atgatcgaagaacattcacaactaaagaagaaggtcattaaggcccctattgaggacctt
gatgtggaaggacaaaagctgctccagcggatacagagcagtgagagttttcccaaaaag
aactctgggtcagggaatgcagacttgcaaaaccttttacccaaagtatccaccatgctg
gaccggctgcactcgacacgacagcatctgcatcagatgtggcatgtgcggaaagtgaaa
ttggaccaatgttttcagctcaggctgtttgagcaggatgctgaaaagatgttcgactgg
atcacacacaacaagggtctgtttctgaacagttacacagagattggaaccagtcatcct
catgccatggagcttcagacacagcacaatcactttgccatgaactgtatgaatgtgtat
gtaaacataaaccgcatcatgtcagtggcaaatcgtctggttgagtcaggccattatgct
tctcagcaaataaaacagattgctggtcagttggaacaagaatggaaggcatttgctgca
gctttggatgaacgtagcaccttactggatatgtcctctatcttccaccagaaagctgaa
cagtacatgagcaatgtggattcatggtgtaaggcttgtggtgaggtagaacttccatcc
gagctacaagatttagaagatgcgattcatcatcatcaaggaatatatgaacatatcact
ctggcttattctgaagtgagtcaagatgggaagtcattacttgataaacttcagcgacct
ttgactcctgggagttctgactcactaacagcctctgctaactactccaaggcagtgcat
catgttcttgatgtcatccatgaagtattgcaccaccagcgacagttggagaacatctgg
cagcatcggaaggttcgcctgcaccagcggcttcagctgtgtgtttttcaacaggatgtt
caacaggtgttggattggattgaaaatcatggggaagctttccttagcaaacacaccggg
gtaggaaaatctttacatcgcgctcgagctttgcagaaacgtcatgaagactttgaagaa
gtagcacagaatacatataccaatgcagataaattacttgaagcagctgagcaactggct
cagacaggggagtgtgacccagaagagatttatcaggctgcccatcagcttgaagaccgg
atacaggactttgttcggcgtgtggagcaacgcaagatcctgctggatatgtctgtgtct
tttcacactcacgttaaagagctgtggacatggctcgaagagttacagaaagagctgctt
gatgatgtgtatgcagagtctgtcgaggctgtgcaagacctgatcaaacgttttggtcag
cagcaacagaccactctgcaagtgacagtcaatgtcatcaaggaaggggaagatcttatt
caacaactaagggattctgccatttctagtaacaagacccctcataacagctctatcagt
cacatagagacagtcctgcagcagctggatgaagcccagtctcagatggaagaacttttt
caggagcgcaagatcaagcttgaactatttctgcagctacgtatttttgaaagggatgca
atagatataatttcagaccttgaatcatggaatgatgagctttctcagcagatgaatgac
ttcgacactgaagatcttacgatagcagaacagaggctccagcaccacgcagacaaggcc
ttgaccatgaataacctgaccttcgatgtcatccaccaaggacaagatctgctgcaatat
gtcaatgaagtgcaggcttctggtgtagagctgctttgtgaccgagatgtagacatggca
actcgtgttcaggatctattggaatttcttcacgagaagcagcaggagctggacttagca
gcagaacagcatcggaaacacttggaacagtgtgtgcagctgcgccacctgcaggctgaa
gtcaaacaggtgcttggctggatccgaaatggggagtccatgttaaatgctggccttatc
actgctagctcattgcaggaggctgaacagctacagcgggaacatgaacagttccagcat
gcaatagagaaaacacatcaaagtgcactgcaggtacagcagaaagcagaggcaatgcta
caggcaaatcattacgacatggatatgatcagggaatgtgctgagaaggttgcttcgcat
tggcagcagctgatgctcaagatggaggaccgactcaaactcgtgaatgcctctgttgcc
ttctataaaacttcggaacaggtatgcagtgtgctggagagcctggaacaggaatataag
cgggaagaagactggtgtgggggagcagacaaactgggtcccaactctgaaacggatcat
gtgacccctatgataagcaagcaccttgaacaaaaagaagcattcctgaaggcttgcaca
ctggctagaaggaatgctgatgtcttcctgaaatacctgcacagaaatagtgtaaacatg
ccaggaatggttactcacatcaaagcccctgaacaacaagtcaaaaatatcttgaatgaa
ctctttcagagagagaaccgtgtactacattattggaccatgcggaaaaggcgacttgac
cagtgtcagcagtatgtggtctttgaaagaagtgccaaacaggctctggaatggatccac
gacaacggagagttctatttatccacacatacctccactggttccagtatccaacacact
caagagttgttgaaggaacatgaagaatttcagatcactgcaaagcaaaccaaagagaga
gtaaagttgttgatacagctggctgatggcttttgtgaaaaggggcatgcccatgcagca
gagattaaaaaatgtgtcactgcagtggataagagatacagagacttctctctgcgcatg
gagaaatataggacatgtttagagaaagctctggggatttcttcagattccaataaatcg
agcaaaagcctgcagctggatataatcccagccagtgttcctggatcagaggtgaaatta
cgagatgctgctcatgagcttaatgaagaaaaacgaaaatctgcccgcaggaaagagttc
attatggctgagctaattcaaacagaaaaagcttatgtaagagatcttcgggaatgcatg
gatacatatctgtgggaaatgacaagtggtgttgaagagatcccacctgggattttaaac
aaagaacacattatcttcggaaacatgcaggagatctacgagttccataataatatattc
ctaaaggagctggagaaatatgaacagttaccagaagatgttgggcactgctttgtcact
tgggcagacaagttccaaatgtatgttacatattgtaaaaataagccagattccactcag
ctgatactggaacatgcaggagcatattttgatgagatacaacagcggcatggattggca
aactctatctcctcttaccttatcaaacctgtacagagaataacaaaatatcagcttctc
ttaaaggagctactcacctgctgtgaagaaggtaaaggtgagattaaagacggcctagaa
gtgatgcttagtgtgccaaaacgagccaatgatgctatgcacctcagcatgctggaagga
tttgatgaaaatattgaatctcagggagagctcattcttcaggaatccttccaagtgtgg
gatcccaaaactctcatccgaaaaggtcgtgagagacatcttttcctctttgagatgtcc
ttagtcttcagtaaagaggtgaaggactccagtgggaggagcaagtacatatacaagagc
aaactgtttacttcagagttgggtgtaacagaacatgtagaaggcgatccctgcaaattt
gcactgtgggtaggacgaacgccaacttctgacaataaaattgtgctcaaggcttctagc
atagagaataaacaagattggatcaaacacatccgggaagtgatacaagaaaggaccatt
catttgaaaggagcgctgaaagaaccaatccacatccccaagactgcgccaacaactaag
cagaagggaaggagagatggggaggacctggacagtcagggagaaggcagcagtcagcct
gatacaatttcaattgcatcacggacttcacagaacacactagacagtgataagttgtct
ggtggatgtgagttgacagtggttatccatgacttcacagcatgcaatagcaatgagttg
actatccgccggggtcagacagtggaagtgctggagaggccgcatgacaagccagactgg
tgtttggtacgaaccacagaccgatccccagctgcagaaggtcttgttccctgtgggtcg
ctttgcattgcccactcaagaagcagcatggagatggagggcatcttcaatcacaaagac
tctctctcggtctccagtaacgatgccagtcctcctgcctcagtaacatcattacagccc
catatgattggtgcacagagttcaccaggtcccaaacgtcctggcaacaccctaaggaaa
tggcttaccagtcctgtgaggcgccttagcagtggaaaggcagatgggcatgttaaaaaa
ttggctcacaagcataagaagagtagagaggtgcgcaaaagtgctgatgctggctctcag
aaggactctgatgacagtgctgctacaccccaggatgaaactactgaagagagaggtcga
aatgaggggctaagcagtggcacactctccaaatcctcctcctctggcatgcagagctgt
ggcgaggaggaaggtgaagaaggagcagatgctgtaccactccctccaccgatggcaatt
cagcaacacagtctactccagccagattcccaggatgacaagacatcttctcgattgttg
gtacggcccaccagctctgagacaccaagtgctgcagaactagtcagcgcaattgaggaa
ctcgtcaaaagtaaaatggcactggaggatcgtccaagttccttgttggtagaccaaggt
gacagcagcagtccatcatttaacccatcagataactccctcctctcctcctcatcacct
atagatgagatggaagaaaggaaatccagttctttaaaacggcgacactatgtcttacag
gaattagtggaaacagaacgagattatgtacgagatctgggctgtgtagttgagggttac
atggcacttatgaaggaagatggtgttcctgatgatatgaaggggaaagacaaaattgta
tttggcaacattcaccagatttatgactggcacagagacttctttttaggagaattggag
aagtgccttgaagatccagaaaaactgggatccctgtttgttaagcatgaaagaaggttg
cacatgtacatagtttactgccaaaacaaaccaaggtccgagcacattgtttcagaatac
attgatacattttttgaggacttaaagcagcgcctgggccaccgacttcagctcacagac
ttgctaataaagccagtacagagaattatgaaataccagctgttactaaaggacttcctc
aaatactctaaaaaagcaaatcttgatacgacagaactagagagagctgtagaggtcatg
tgcatagtaccaaaacgatgcaatgacatgatgaacgttggtcgcctgcaaggatttgat
ggtaaaattgtagcccagggtaagctcctgctgcaagacactttcttggtcacagaccag
gacacaggacttctgccacgctgcaaagaaagacgtgtcttcctgtttgaacaaattgtc
atatttagtgagccactagataaaaagaaaggtttctccatgccgggattcttgtttaaa
aatagtatcaaggtgaattgcctttccctggaggaaaatgtggacaatgatccatgtaaa
tttgcactaacatcaagaacaggtgatgtcacagagacgtttgttttgcattctgctagt
ccaggagtccgccaattatggatccatgaaattaaccaaattctggaaaaccagcgcaat
tttttaaatgccttgacatcacccattgagtatcagaggaatcacagtagtggtggcggt
ggcagcagtggcagcggtgctggtggtggctgcggtggtggaagtagtagcagcaacagc
agtggtcccagcagctgtagcggaattaccagttccagccgtagcaggccatcccggatc
ccccagcctgtcagacaccattccccagtcctggtctcctctgcagcttcagcccaagca
gaggcagacaagatgtcaggtatgtccattcccaatccctccttgccactccacagcacc
tccttagagactggcctcagccaggtagacaggcatcctctcagtacagagctggatggt
cctcggagagaaactgagcagattcccaagatgaaggttattgagagtcccaggaagaca
gctggaagtgtttctggctcagctgatggagcccagaaagaattgcgtgggagcatggag
gacaatcgctcaaggagcagcataggatccctaacacttgggaagtcaaggccaggagcc
atctcaccactgaattctcctctttcaacgacttttccttctccttttggcaaggaaact
tttccacccagcagccccctgcagaagggctccttttggagctccatcccagcttcccct
gccagtcgccctggctccttcactttccctggggacagtgactccctccagcggccggtc
caccaccactcttcacacagcaaggacacagaccgcatgagtacatgctcctcgaccagc
gagcagtcaattcactccacccaaagtaatgggagtgaaagtagcagcagtagcaatatc
tccaccatgctggtaacacacgattacacggcagtgaaggaggatgagataaatgtctac
caaggagaggtcgtgcagattctagccagcaaccaacagaacatgtttttggtgttcaga
gccgccactgagcagtgtcctgcagccgagggctggattcccggctatgtcctggggcat
accagtgcagtcatcattgataaccctgatggaacaatcaagaagtcaacatcttggcat
acagcactccgtttaaggaagaaatctgagaaaaaagataaaggcggcaaaagggaaggc
aaactagaaaatggttatcgtaaatcccgagaaggacttgccaccaaggtttccgtgaag
cttctcaaccccaactacatttatgatgttcccccagagtttataataccattgagtgag
gtaacttgtgagacaggagagaccatcatgcttaggtgtaaagtctgtggtcgccctaaa
gcttcagtcacttggaagggtcctgatcataacacactaaacaatgatggtcattacagt
atctcttacagtgatttaggagaggcatcactaaaaatcattggtgtgaccacagaagac
gatggtatctatacctgcatagctgcaaacgacatgggttcagtttcatcttcagccagt
ttgcgagttttaggtcctggaagtgatgggatcatggtaatctggaaagacaactttgat
tccctttacagtgaagtggctgagcttgggaggggcaggttttcagttgtgaagaagtgt
gatcagaagggaaccaagcgagtagtggccactaagtttataaacaagaagttgatgaaa
cgagaccaggttacccatgaacttggaatcatgcagaatctccagcatccccaactcatt
ggcctccttgatacctttgagacttccaccagctatgtcttagtattagagatggctgac
cagggtcgccttctagactatgttgtgcgatggggaaacctcactgaagggaagatcagg
ctttatctggaagagattctggaagctatacaatatcttcacaactgcagaatagcacac
ctggacctaaagcctgaaaatgttttggtggatcagagctctgctaagccaacaataaaa
ctggctgacttcggagatgcagtccagctcggtaccacctattatatccaccagttactt
ggaaacccagagtttgcagctcctgaaattatcctcggaaatcctgtctccctcacctca
gatgtttggagcattggagtgctcacgtatgtccttcttagtggcgtgtctcctttcttg
gatgaaagcgtagaggaaacttgcctgaatatttgccgcctagactttagtttcccagat
gactacttcaaaggagttagccagaaggccaaagattttgtatgtttcctacttcaggat
gacccagtgaagcgtccatctgcagccgtgggcctccaggagccttggctgcagctgggg
aatagcaaaagtgctgacagcattgatacctccagactgacttcgttcattgagcggcga
aaacaccagaatgatgttcgacccatccgtagcattaaaaatttcttacagagcaggctt
ttgccaagagtttga
DBGET
integrated database retrieval system
