Alligator mississippiensis (American alligator): 102558295
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Entry
102558295 CDS
T03087
Symbol
BBS1
Name
(RefSeq) Bardet-Biedl syndrome 1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102558295 (BBS1)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
BBSome
102558295 (BBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
DUF2863
Motif
Other DBs
NCBI-GeneID:
102558295
NCBI-ProteinID:
XP_019353984
LinkDB
All DBs
Position
Un
AA seq
491 aa
AA seq
DB search
GLGALRSGQPGPRAPSLAVPAGAAVYVYQNLRPFYKHRLPPRAPAPLERDVWDQARQDKI
DPLMLKEMLESIREKAEIPLSARSLRFLTLEPGELQAFVTLHKDQPLQHQTVITCMTTLR
KDLADEDGATCLVLGTESREVLILDPEAFTGLAQMMLPAVPAFLEATGQFDVEYRLTAAC
RNGCLYLLRRDSRRPRCCIELSAQPVGLVRVQKTLVVGCSDDTLRGYTQKGKRLWTVQLP
APLLTMALLEQKSRGFQAVLAALSNQEVHVYRDKALLDVIQTPDVVTGLIFGRYGREDST
LLMTTKGGGLLVKMLKRRAVLEAPLAPGPPLAQAVRLAVPKKTRLYVDQTLREREAGAAM
HQVFQTELSRLRLSAARAYVRALQGSLAPLSATPQHPLSLRATVQGIGPTFKLTLHLQSA
APAGASTGLLLSFQYDEHLYAMASSLLRTPMLVPGLNYPIETFVECLSDKGISDIIKVPV
HFQGAQDWGAW
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gggctgggggcgctgcgctcgggccagccgggcccccgggcccccagcctggccgtgccc
gccggggccgccgtctacgtctaccagaacctgcgccctttctacaagcatcgcctgccc
ccccgtgcccccgccccgctggagcgcgacgtctgggaccaggcccggcaggacaagatc
gacccgctgatgctgaaggagatgttggagagcatccgagagaaggctgagatccccctg
tcagctcggtctctgaggttcctgactttggagcccggggagctccaggccttcgtgacc
ctccacaaagaccaaccgctgcagcaccagactgtgatcacctgcatgaccacgctgagg
aaggacctggctgatgaggatggtgccacctgcctggtgctcgggacagagagcagagag
gtcctgattctggaccccgaggccttcactggcctggcacagatgatgctccccgctgtc
ccggccttcctggaggcaacagggcagtttgatgtggagtaccggctcacggccgcctgt
cgcaatggctgcctctacctgctgcgccgggactccaggcgcccacgctgctgcattgag
ctgagcgcccagcctgtgggcctggtccgcgtccagaagacccttgtggttggctgctcc
gatgacaccctgcggggctacacccagaagggcaagcggctgtggaccgtgcagctccca
gccccactgctgaccatggcactgctggagcagaagtcccgtgggttccaggccgtcctg
gccgccctcagcaaccaggaggtgcatgtgtaccgggacaaggccctcctcgatgtcatc
cagaccccggatgtggttactggcttgatcttcgggcgctatgggcgtgaggacagcacc
ctcctcatgaccaccaaagggggcggtctgctggtgaagatgctgaagcggcgggcggta
ctggaggcaccattagcccccggcccccccctggcccaggccgtgcgcctcgctgtgccc
aagaagacgcggctctatgtggaccagacactgcgggagcgtgaggctggtgccgccatg
caccaggtgttccagacagagctgagccgcctccgactgtcggctgcccgtgcctatgtc
cgcgccctccagggcagcctggccccactcagcgccactccccagcatcccctcagcctg
cgggccacggtccagggcattggccccaccttcaagctgacactgcatctccagagcgca
gcacctgctggggccagcactgggctgctgctcagcttccagtatgacgagcacctgtac
gccatggccagctccctgctgcggacccccatgctggtccccggactgaactatcccatc
gagacctttgtggagtgtctcagtgataagggcatctctgacatcatcaaggtaccagtg
catttccagggggcgcaggactggggggcatggtga
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