Alligator mississippiensis (American alligator): 102558340
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Entry
102558340 CDS
T03087
Symbol
TUBB1, TUBB4B
Name
(RefSeq) tubulin beta 1 class VI
KO
K07375
tubulin beta
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
amj04540
Gap junction
amj04814
Motor proteins
amj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102558340 (TUBB1)
09144 Cellular community - eukaryotes
04540 Gap junction
102558340 (TUBB1)
09142 Cell motility
04814 Motor proteins
102558340 (TUBB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102558340 (TUBB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102558340 (TUBB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102558340 (TUBB1)
04147 Exosome [BR:
amj04147
]
102558340 (TUBB1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
102558340 (TUBB1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
102558340 (TUBB1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102558340 (TUBB1)
Exosomal proteins of colorectal cancer cells
102558340 (TUBB1)
Exosomal proteins of bladder cancer cells
102558340 (TUBB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
102558340
NCBI-ProteinID:
XP_006271811
UniProt:
A0A151P055
LinkDB
All DBs
Position
Un
AA seq
467 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISDEHGIDTSGNYHGDSSMQLERINVYFNEAVSHRYV
PRSVLVDLEPGTMDSVRSSRIGPLFRPDNFIHGNTGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIKEEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLPSPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRTLSVPELTQQMFDARNMM
AACDPRHGRYLTVACIYRGQMSTKEVDEELLAIQTKNSSYFVEWIPNNVKVAVCDVPPRG
LKMAATFIGNNTAIQELFKRVSEQFSAMFKRKAFLHWYTGEGMDEMEFSEAEGNANDLVS
EYQQYQDATADVEEYEEVEVKHEEAEVKTSREQEAVIVTSESYPTAV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtgcatcttcagattggccaatgtggaaaccaaattggatctaagttc
tgggaagtgataagtgatgagcatggaattgatacctctggaaactaccatggtgattct
tcaatgcagctggaaagaattaatgtgtacttcaatgaagctgtttcccataggtatgtg
ccccgttctgtcttggtggacctggaacctggaactatggatagcgtacggtctagcaga
ataggccctctctttcgacctgacaattttattcatggtaacacaggtgctgggaacaat
tgggctaagggccactatacagaaggagctgagctgattgagaacgtgatggatgtggtc
aggaacgagtgtgagagttgtgattgtctgcaggggtttcagcttatccactcacttgga
ggcggcacaggatctggtatgggcacactcctcatcaacaaaatcaaagaagaataccct
gacaggattatgaacaccttcagcgtagtgccttcacccaaagtttcagatacagttgta
gagccatataatgccatactgtctatccaccaactgatagagaacactgatgaaactttt
tgtattgacaatgaagctctgtatgacatatgctttagaaccctgaagctccccagtccc
acttatggtgatcttaaccatcttgtttccctgaccatgagcggcgtcaccacctctctc
cgttttcctggtcagctcaatgcagatctgaggaagctggctgtaaacatggtacctttc
cctcgcctacacttctttatgcctggctttgctccactgacagcccgaggcagccaacag
tacagaactctttcagtgccagagcttacccaacaaatgtttgatgcccggaacatgatg
gctgcctgtgaccctcgtcatggacgatacttgactgtagcatgcatctatagaggacaa
atgtctaccaaagaagtggatgaagagttgctggctatccagactaagaatagtagctac
tttgtggaatggattcctaacaatgtaaaagtggcagtgtgtgacgtacctccacgtggc
ctgaagatggcagccacctttataggcaacaacacagctatacaggaactcttcaagaga
gtttctgaacagttctcagccatgttcaaaaggaaagcatttctccactggtatactggt
gaaggcatggatgaaatggagttttctgaagcggaaggcaacgccaatgatttagtttct
gaataccaacaataccaggatgccacagctgatgtagaggaatatgaagaggtcgaagtg
aaacatgaagaggcagaagtgaaaactagccgagaacaggaagcagtaattgtaacgtca
gaaagctatccaacagcagtctga
DBGET
integrated database retrieval system
