Alligator mississippiensis (American alligator): 102558357
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Entry
102558357 CDS
T03087
Symbol
HNF1B
Name
(RefSeq) HNF1 homeobox B
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102558357 (HNF1B)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102558357 (HNF1B)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
102558357
NCBI-ProteinID:
XP_014463580
UniProt:
A0A151N5Z1
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Position
Un
AA seq
562 aa
AA seq
DB search
MVSKLSSLQQELLSALLSSGATKEAVVQALEDMGRPAAAAGFGVKLESLPLSPGAAGPEP
DGKAGFAPLSNGHAKGKLSGDEGSEDGDDFDTPQILRELQALNTEEAAEQRAEVDRMISE
DPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQ
REILRQFNQTVQGSGNMTDKSSQDQLLFLFPEFNQQSQGVGQLDDACSETPSKKMRRNRF
KWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRV
YNWFANRRKEEAFRQKLAMDAYSTGQPHSMNLLLSHSSPHHTQPSSSPPSKMSGVRYNQQ
GSNEVTSSSTISHHGNSAMVTTSQSVLQQVSPAGLDPGHNLLSPDGKMISVSGGGLPPVS
TLTNIHGLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQF
SQQLHSSHQQPLMQQSPSHMTQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVT
DTSSISTLTNMSSSKQCPLQAW
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctgagctcgctgcagcaggagctcctgagcgcgctgctcagctccggg
gccaccaaggaggcggtggtgcaggcgctggaggacatgggccgccccgccgccgccgcc
ggcttcggcgtgaagctggagagcctgccgctgtcccccggcgcggccgggcccgagccc
gacggcaaggccggcttcgccccgctcagcaacgggcacgccaagggcaagctgtccggc
gacgagggctccgaggacggcgacgacttcgacacgccgcagatcctgcgcgagctgcag
gcgctcaacacggaggaggcggcggagcagcgcgccgaggtggaccgcatgatcagcgaa
gacccctggcgggctgcaaaaatgatcaaaggttacatgcagcagcacaacatcccccag
agggaggtggtggatgtcaccggcttgaaccagtctcacctctcccagcacctcaacaag
ggcacccccatgaaaacgcaaaagcgggcagcgctctacacgtggtacgtccgcaagcag
agagagatcctcagacagttcaaccagacagtccagggttctggaaatatgacagacaaa
agcagtcaggatcagctgctgtttctctttccagagttcaatcagcagagccagggcgtg
gggcagcttgacgacgcctgctctgaaacccccagcaagaagatgcggcggaatcgcttc
aaatgggggcctgcctcgcaacaaatcttgtaccaggcctacgaccgccaaaagaacccg
agcaaggaggaaagggaggcgctggtggaggaatgcaatagggcagagtgcctccagcgt
ggggtgtccccttccaaagcgcatgggctgggttccaacctggtgaccgaggttcgcgtc
tacaactggtttgcaaaccggcggaaagaggaggcctttcgtcagaagctggccatggac
gcctacagcacgggccagccgcacagtatgaacctcctgctctcccacagctcgccccac
cacacccagcccagctcctcgccgcccagcaaaatgtcaggagtccgatacaaccagcag
gggagcaatgaggtcacttcctcctcgacaatcagtcaccatgggaacagtgccatggtg
accaccagccaatctgtcctccagcaggtttctccagcaggcttggacccaggccacaat
ttactctcgcccgatggtaaaatgatctccgtgtcgggaggcgggctgcctcctgtgagc
accctgaccaacatccacggcctgtcccatcacaacccccagcagtcccagaacctcatc
atgacgccgctctcgggagttatggccatcgcgcaaagtctgaacacctcccaagcgcag
agcgtacctgtcatcaacagtgttgccggaagtttagcagctttgcagccggtccagttt
tcccagcagctgcacagttcacatcagcagcctctcatgcagcagtctcccagtcatatg
acgcagcagccttttatggccacggtgactcagctacagaactcacacatgtatgcacac
aagcaggagcctccccagtattcccacacttcccggtttccatcagctatggtggtcaca
gataccagcagcatcagcacattaaccaatatgtcttccagtaaacagtgccccctgcaa
gcctggtga
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