Alligator mississippiensis (American alligator): 102558578
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Entry
102558578 CDS
T03087
Symbol
LAMP1
Name
(RefSeq) lysosomal associated membrane protein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03272
Virion - Hepatitis viruses
amj03273
Virion - Lassa virus and SFTS virus
amj04140
Autophagy - animal
amj04142
Lysosome biogenesis
amj04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102558578 (LAMP1)
03272 Virion - Hepatitis viruses
102558578 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102558578 (LAMP1)
04142 Lysosome biogenesis
102558578 (LAMP1)
04140 Autophagy - animal
102558578 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102558578 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102558578 (LAMP1)
04090 CD molecules [BR:
amj04090
]
102558578 (LAMP1)
Membrane trafficking [BR:
amj04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102558578 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
102558578 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
102558578 (LAMP1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
102558578 (LAMP1)
CD molecules [BR:
amj04090
]
Proteins
102558578 (LAMP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
102558578
NCBI-ProteinID:
XP_006272537
UniProt:
A0A151NWT3
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
MARPRAPVLLAAAAALLGFLQTSFSFEVKESGKICIVADLLVNFSVEYPAKAHQEMANFA
LPQTATVLHNSTCGKGDAPTPVLVIGFGMGQSLSLKFMKTSNQYRVEELTFSYNLSDAAF
FPSSSAGGTMEVSQKTDIQANLGTRYRCISTDQVNMKNVNVTLSNVTLEAYLVNNTLSVN
ESECTRDKPMTTIATTTARQTTSQVPTTTSPAPTTLPQNPTVGKYNVTGKNGTCVLASMG
LQLNVSYERKDGKTGLDVLNFIPSNTSFSGNCDNSSAFLNLTFGKAKLIFHFVRNTSIEK
FFLQGVTVSTTLPPEAKKPQFEAVNNSMSELGASVGNSYMCNAEENLLVTQGAFVNLFNV
QVQVFKIDGDKFGAVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccccgcgctcccgtgctcctggccgctgctgccgcgctgctcggttttcta
cagacttccttctcatttgaagtgaaagagagtggtaaaatctgcatagttgctgatctg
ttggtaaacttctcagtggaataccctgccaaggctcaccaagagatggcaaattttgca
cttccacaaactgctactgtactgcacaacagcacttgtggtaaaggggatgcacctact
ccagttctcgtgattggatttggaatgggacagtccttaagcctgaaattcatgaagacc
tcaaaccagtacagagttgaagagttaaccttcagttacaatttgtctgatgcagctttc
ttccccagttcctcagctggaggaacaatggaagtatcacaaaaaactgatattcaggca
aacttgggtacaagataccgatgcatcagtacagaccaggtcaatatgaagaatgtcaat
gttactcttagcaatgttacgcttgaagcatatcttgtgaataataccttaagtgtaaat
gaatctgaatgtaccagagataaaccgatgactaccattgctactacaactgccaggcag
actactagccaggtgcctaccactactagtccagcaccaaccacactgccgcaaaaccca
acagttggtaaatacaatgtgactggtaaaaacgggacctgtgtacttgcttctatgggg
ctgcagcttaatgtatcctatgaaaggaaagatggaaagactggattagatgtgctgaat
ttcatcccatctaatacatctttctctggaaactgtgacaattcctcagccttcttgaac
ttgacttttgggaaagccaagctcatcttccacttcgttcggaacacaagtattgagaag
tttttcctgcaaggtgtcaccgtgagcacaactttgcctcctgaagccaaaaaaccgcag
tttgaggctgtgaacaacagcatgagtgagcttggtgcttcggtgggaaattcctatatg
tgtaatgcagaggagaatctcttggtcacacaaggagcttttgtcaacctgttcaacgtt
caggtccaggttttcaagattgatggagacaaatttggggcagtggaagaatgccagctg
gatgaaaacaacatgttgatccctatcatagtaggtgcagctcttgctggacttgtcctg
atagtcttgattgcttatttgattggaagaaagagaagccatgctggatatcagacaatt
taa
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