Alligator mississippiensis (American alligator): 102558656
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Entry
102558656 CDS
T03087
Symbol
RTTN
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102558656 (RTTN)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102558656 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UL97
Motif
Other DBs
NCBI-GeneID:
102558656
NCBI-ProteinID:
XP_019346084
LinkDB
All DBs
Position
Un
AA seq
2013 aa
AA seq
DB search
MQDFPAEIFLQRPKIVQSLLSLLNLAFGRDGKHHLALQAVSCLQQLCIFLRNRLNFHRDP
SFFSSEQASQNSSVSYCHEARGPPHSQNPSPGSSSPRPSVIGRTGQRPRGDGQDWDRASS
SESSTPAPANSRLSLQSPLDIGNNGLPEVENEDSLELQMQQLSLPQFCVSILEYAVPLLR
TGSRKVTMQVLELLAEDIFLIGDAISEDVWEDSSLFGLELKDKLLTVFNSLGETISYHKS
NVSSEQPEMMMVHHRMAFISISLFTVRLLQTLLPVEKANNVLPESLLTALFVLSLDMPFS
LEYPNTHESVAAYLEQMNSENYSIYKQAAEAAYSIECTCNFMMDTHKEGEKNLFELIELA
DQALGSLSYHQHFPLLQEFIHICSNIWKSAQASPRLRTESQKVLLRLLSHPLLNIKNEAY
RCCLETVKECLGIHNVAKPVSSVCHGVRFLLHPKVLYEISTFGLQESKNEVNSAAKAILI
YLLQGQLMMTAMTWNNFIEALYPIIPILQGYADAEDTLGKSILALSETTSDKGEGILPRT
TRLRAALRLLFSKKQLVRSMALKHLTFHLTNEEGASLKRPLLHGSVFTSVPNLFVVEKPI
ELKLDDTRESVFKAETVEKLYALLTSDTVDLVLRKSAAEQLAIIMQDTKFHDFLKKWGVI
DKIHAYLTECVHRDGKIMECIVLPCLTLLRKLVYADPVTRLSLTQQPAVLLMLFRVSLIF
QDNCTVLTETAVLLFLLLFDEVSRKETWASISSDYSSQLTFSLPVAVVRRYHVPVIVTTH
HAVSPNALVLPISFESLNFKPVSDMLKMAWNLSWYHGIDNMLQLVNYETEAQAFLDTLKL
SSEDILTLKITHTASGLQDCLNSIVQAVSHREVRAAVTRMSFYILNDRLALKFSTGSCGA
TLKCLAWQTTLNRFLQVLPASTEDEELLTDVISFLSKLLRAQRRNLEVDHLKWILETLLK
NNPTSLLDLLVRPESQVQDEKDNVQTTIRQRLEKELIGLSNTLLFCFMSVTDRKGLELAD
CFRTQLALKLLQCLRVTNAPHFYGLPSLERTLRGMVHVTAFPGWSTRSVTTEPFTICMKY
LTGLLEVISSFYVEWGGNAMSFMGKGVTKSTVLCLLHLSHEMIAQAKNTDLISLWFLPYE
NSEEEDPSRLGLAWLIPLWVDRDPEVRFTSLGIGSALTSLEAGCIALADSCQNISGGLWG
TVINIFLDQSECSMVRREAAFILQNLLVIPMPTEEKKDCVWQGPCVHDEESGVSQIGKPA
LQALLYHCHFYEHLKQMVKNCYLGRYIFDLNCSLGDSLIAQRSCISDFDDLVNLWRAPAS
QSQSLHSQSTSDTMILSASPSVESADELQVPVSSHSTSFIPETPVDRLLAQGQSDTITTA
PPSPCDSPLSTVLAKQHAVVTPPLVSAVCSLLDNLLAVMPKDTGIALQKAHLLPLLSSLV
NASLVERCILELKAPLPHPCHSEHTKVQVLLLLQYLSSVSRLLQSCLLVDIQLVIQDELL
KPLLENVFVILSISAKDGLDTELTSALHQTWTDLFSLLATLLRKSGQISLPSVTAALANH
WTAIIDTVCDCVHLSTMCPDLYVSSLQFLSILLAEEGKRQLQDKQNICKNPTIIFLLDEA
AESRASVTQLNELLIESYEGKSSKDMLKRVCASALLTLLAVSKTTQKHALQANLVDRCIE
QMKRIHAQLNLDSLRPGKPTQKKKEDSLITELKGAMQLLRNCLYRNEECKAVALEAHLVP
VLHCLWPWFLMDDSLMQIGLHLLCVYTANYLAGCTSLCWASGGPSALQSTQRNAPTTSLM
YNIMKLASQTAAENSIIQQTAFSLLSNLAVSHDCKGVIQKSNFLQNFLSLSLPKGVNKNF
SKLASLWLKLLLNISFGEDGQQMIMKLNGSLDRIVEMSKYKHKSHHLALLILHNMCFSST
NKPKILANDKAIAVLSSCLESDSLTVQRIGASALWALLHNYQKAKVTLKNPSIKRRIDEA
YSLVKKTLPQPEENQLKGYHLKCLENLVQLLNN
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttccctgctgagatctttcttcagagaccaaagattgttcagagccttctg
tctttgctaaacttagcttttggaagagatggaaaacaccatttagccttgcaggctgta
tcatgtctgcagcagttatgtatcttcctaagaaacaggctgaactttcacagagatcca
agttttttctccagtgaacaagcttcccaaaattcctctgtgtcttattgccatgaagca
agaggacctcctcattcccagaatccgtcccctggaagtagtagccctcgaccatctgtg
attggacgtacaggtcagcgtcctagaggcgatggccaggattgggatagagcatcttcc
agtgaaagcagtactccggctcctgcaaattccagattatctctgcagtcgccactggat
ataggaaacaatggcctgccagaggtggaaaatgaggactctttggaattacagatgcaa
cagctcagccttcctcagttttgtgtgtccatcctggaatatgctgtacctcttttaaga
acaggcagtagaaaagtgacaatgcaagttcttgaattgcttgctgaagacatatttctt
atcggtgatgctatatcagaagatgtttgggaagatagcagcctctttggattagagttg
aaagataagctgcttacagtttttaattcacttggagaaaccatatcctaccacaaaagc
aatgtcagttcagagcaacctgagatgatgatggtgcaccacagaatggcttttataagt
atttcacttttcacggtccgattgttacaaacccttctccccgtagaaaaggccaacaat
gtgttaccagagagcttgctgactgctttatttgttctgtccctggacatgcccttttct
ttggaatatccaaacactcatgaatctgttgcagcctatctggagcagatgaattctgag
aactacagcatttataagcaagctgcagaagcagcttattcaattgaatgcacttgtaac
tttatgatggatacccataaggagggggagaagaatctttttgagttaatagaattggca
gatcaggccctcggtagtctttcttaccatcaacactttccattgcttcaggaattcatt
catatttgctctaatatatggaagtctgcccaggctagtccacggctgaggactgagagc
cagaaggtgctcctccgtttgttgtctcatcctctgctgaatataaaaaatgaagcttat
cggtgctgtctggaaactgttaaggagtgtttaggtatccataatgtcgctaaacctgtt
tcttctgtttgccatggagtgcgttttcttcttcacccaaaagttttatatgaaatttct
acgtttggacttcaggagtctaaaaatgaggtgaactctgctgccaaggccattctgatt
tatctgttacaggggcaattaatgatgacagcaatgacctggaacaattttattgaggct
ctttatcctatcattccaattctgcagggttatgcagatgccgaagatacactgggtaag
agcatccttgccctgagtgaaacaacttctgacaaaggagaagggattctccctagaact
actagactaagggctgctctccgacttcttttctcaaaaaagcagttagtgcgttccatg
gcacttaaacatctaacattccatctcacgaatgaagaaggagccagcctgaagcgccct
cttttacatggcagtgttttcaccagtgttcctaacttgtttgttgtggaaaaacctatt
gagctgaagctggatgacacaagagagtccgtttttaaggctgaaactgttgaaaaacta
tatgctcttcttacttctgatacggttgacttagttttgagaaagtctgcagcagagcag
ctagctatcatcatgcaagatactaagtttcatgacttcttgaaaaaatggggtgtgata
gataagatacatgcttacctgactgaatgtgtacaccgggatggcaagatcatggaatgt
atagtcttaccatgtcttacacttttacgaaagcttgtatatgctgatccagtgacacgt
ctgtcattaacacagcagcctgctgtcctgctcatgctattcagagtatccttgatattc
caagataattgcactgtcctgactgaaactgcagtattgctttttcttctgttgtttgat
gaagtatcaagaaaagaaacatgggccagtatatctagtgactattctagccaactgacc
tttagcttgcctgttgctgttgttagacggtatcacgttccagttatagtaactactcat
catgctgttagcccaaacgctcttgtcttgccaatatcttttgaaagcttgaacttcaaa
cctgtatcagacatgctgaagatggcttggaatctgtcctggtaccatgggattgataac
atgttgcagctggtgaactatgaaacagaagcacaagcgtttttagacacattaaagcta
tcctcagaagacatcctcacattgaagataacacacacagccagtggactgcaggattgt
cttaattcaattgttcaagcagtgtcccacagggaagttagggctgctgtcactaggatg
agtttttatattctaaatgacagacttgctttaaaattcagcactggttcttgtggggcc
actttgaagtgcttggcttggcaaacaacattaaacaggtttctgcaagttctcccagct
tctacagaagatgaggagcttctgacagatgtcataagttttctaagcaagttgcttagg
gcgcagaggaggaatttggaggtggatcatttaaaatggatcttggagacactgcttaaa
aataatccaacttcattgctagatcttcttgtgcgaccagaatcccaggtgcaggatgaa
aaagataatgtacagactacaatcaggcaacgattggagaaagaactcattggtctctct
aacaccttgctattctgcttcatgtcagttactgacagaaagggcttggaacttgctgac
tgtttccgaacacagctggctttgaaactgctacagtgtttacgggtaacaaatgcaccc
cacttctatggacttccttctctggagagaactttacgaggaatggttcacgttactgca
ttcccaggctggagtacacgttctgtcacaactgaaccattcacaatttgtatgaaatat
ttaacaggtcttcttgaggtcatctcatctttttacgttgagtggggaggaaatgctatg
tccttcatgggaaaaggtgtcaccaagagcacagtactttgcttgcttcacttgtcccat
gaaatgatagctcaagccaaaaatacagatttgatctctctctggttcttgccttatgaa
aacagtgaagaagaagatccttctcgactaggtctggcatggctgattccgttatgggta
gacagagaccctgaggtaagattcacatcacttggaattggatcagctcttacatctctt
gaagcaggatgcattgctttagcagacagctgtcagaacatttctggaggattatgggga
acagtaataaacatatttctggatcaatctgaatgtagcatggtacgccgggaggctgct
tttattcttcagaaccttcttgtgatcccaatgcctactgaagagaagaaagattgtgtt
tggcagggtccttgtgtacatgatgaagagtctggcgtatctcaaataggaaaacctgcc
cttcaagctctgttataccattgccacttctatgaacatttgaagcagatggtgaagaac
tgttaccttgggcgctacatatttgatttaaattgttcccttggagacagcctcatagct
caaagaagttgcataagtgactttgatgatttagttaatctttggagagctccagccagt
cagagccaatctctacattctcaatcaacatctgatactatgatcctttctgcatcaccg
tcagtagaaagtgctgatgagttgcaggtgcctgtctcatcacattcgactagctttatc
cctgaaacaccagttgatcgacttctggctcaaggtcagagtgacacaattacaacagca
cctccaagtccatgtgattctcccctgtccactgttctcgctaaacagcatgctgtagtc
acacctcctcttgtgtcagctgtatgtagcctgctggacaacctgctggctgtcatgcca
aaggatactggaattgcactccaaaaagcacacttattaccacttctcagtagccttgta
aatgctagcttggtagagagatgtattttggaactgaaagctccattgcctcatccatgt
catagtgaacatacaaaagtgcaggttttgttgctgcttcagtatttatcatcagtatcc
aggcttctgcagtcatgcttattagtagatattcagcttgtgatccaagatgagctactg
aaacctcttttagaaaatgtgttcgtgatcctctctatatctgctaaggacggcttggat
actgagttaacatctgctcttcaccaaacatggacagacttgtttagccttctggctaca
ttgttaaggaaaagtggccaaatctctcttccatctgtgacagcagctcttgcaaatcat
tggactgccataattgatacagtttgtgattgtgtgcatctgtctaccatgtgccctgac
ttatacgtgtccagtttgcaattcctctccattctgttggctgaagaagggaaaagacag
ctccaagataaacagaatatttgcaagaacccaacaattatttttcttctagatgaagct
gcggaaagtcgggcatcagtgacccaacttaatgaactattaattgagagctatgaagga
aagtcctctaaggacatgctgaagcgagtttgtgcaagtgctttactgacactgttggct
gtcagtaagactacacagaaacatgccttgcaagctaacctcgtagacagatgcatcgaa
cagatgaagcgcattcatgcgcagctgaacctagattccctaaggcctggaaaacccaca
cagaagaagaaggaggacagccttatcacagaattaaaaggtgctatgcagcttctaaga
aactgcctgtacagaaatgaagaatgcaaagcagtagcacttgaggctcaccttgtccct
gttcttcactgtctctggccatggtttttaatggatgattccttaatgcaaataggtctg
catttgctttgtgtctacactgcaaactatctggcaggttgtacttctctttgttgggca
agtggtggaccgtctgcacttcagagcacacagagaaatgcacctaccacctctcttatg
tataacatcatgaaattagcttcccaaacagcagctgagaacagcataattcagcaaacg
gccttttctcttctttccaaccttgctgtgtcacatgactgcaaaggtgtgattcaaaag
agtaacttcttacagaactttctgtctctgtcattgccaaaaggagtaaataaaaacttc
agtaaactggccagcctttggctaaagctcctattgaacatttcctttggagaagatgga
cagcagatgatcatgaaactaaatggtagcttagaccgaattgttgaaatgagcaaatat
aagcataagagtcaccacttagcacttcttatcctgcacaatatgtgctttagttcaact
aacaaacccaagatactggctaatgataaagctattgcagtgctgtcttcctgtttggaa
agtgacagtcttactgttcagagaattggagcatctgcactttgggctttgcttcacaat
tatcagaaggcaaaagtgactttgaagaatccttcaataaagagaagaatagatgaggcg
tattctttagtgaagaaaactcttccacagccagaagaaaatcagttaaaaggctaccac
ttaaaatgtttagagaatttagttcagcttctcaacaattaa
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integrated database retrieval system
