Alligator mississippiensis (American alligator): 102558796
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Entry
102558796 CDS
T03087
Symbol
PSEN1
Name
(RefSeq) presenilin 1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04310
Wnt signaling pathway
amj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102558796 (PSEN1)
04330 Notch signaling pathway
102558796 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102558796 (PSEN1)
Peptidases and inhibitors [BR:
amj01002
]
Aspartic peptidases
Family A22: presenilin family
102558796 (PSEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Consortin_C
DUF5523
Motif
Other DBs
NCBI-GeneID:
102558796
NCBI-ProteinID:
XP_006272619
LinkDB
All DBs
Position
Un
AA seq
468 aa
AA seq
DB search
MTELSAHLPQFQHGQLTENFPDSHLSNTNDNSERRRHDNNDRRRNDNPESETNGQAQNST
RQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFT
EETDTVGQRVLNSVLNATIMISVIIVMTILLVVLYKYRCYKVIHGWLIISSLLLLFFFSF
IYLGEVFKTYNVAMDYITLALLIWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIK
YLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMIWLVNMA
EEDPETQRKNSKNSTYDKQAPANQTQNEEAEVEDGGFSQEWQQQRDSRIGPIESTPESRA
AVQALPSNSQTSEDPEERGVKLGLGDFIFYSVLVGKASATANGDWNTTLACFVAILIGLC
LTLLLLAIFKKALPALPISITFGLVFYFATDNLVQPFMDQLAFHQFYI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacggaactatctgcacacttacctcagttccagcatgggcagctgacagaaaacttc
cctgacagccatctgagcaatactaatgacaacagtgaaagacggcgtcatgataacaat
gaccgaaggcgtaatgataaccctgaatcggagactaatgggcaggcccagaacagcaca
cggcaagtggtggagcaggatgaagaagaagatgaggagctgactttgaaatatggggca
aagcatgtgattatgctctttgttcctgtcacactttgcatggtggtagttgttgcaacc
atcaagtccgtcagcttttacacacgcaaagatgggcagcttatctacactcccttcaca
gaagaaacggatacagtgggacaaagagtactgaattctgttctcaatgctaccatcatg
atcagtgttatcattgtcatgactatactcttagtggttctttacaaatacaggtgctat
aaggtgatccatggctggcttatcatttcttctctcttgctgcttttctttttctcattc
atctacttgggtgaggtttttaaaacttataatgttgccatggactacattaccctagcg
ctcctgatctggaacttcggtgtggtgggaatgatctgcattcactggaagggcccactt
aggctccagcaagcatatcttattatgatcagtgctctcatggccctggtattcattaaa
tatcttcctgagtggactgcatggcttatcctggctgtgatttcagtatatgatctggtt
gctgtcctgtgtcctaaaggtcctctccgtatgcttgttgaaacagctcaagagagaaat
gaaactcttttcccagcacttatctactcgtcaacaatgatatggctagtgaatatggct
gaggaagacccagaaacccaacggaaaaattccaaaaactccacttacgacaaacaagcc
ccagcaaaccagactcagaatgaagaggctgaagtagaggatggaggattcagtcaagaa
tggcagcaacaaagagatagtagaatagggcccattgagtctactcctgaatcccgagct
gctgtccaagctcttcccagtaactcccaaaccagtgaggacccagaagaaaggggagtg
aagctcggtttaggagacttcattttctacagtgttttggttggcaaagcctcagcaaca
gcaaatggagactggaacacaactttagcatgttttgtagccatactaattggtctgtgc
cttactctcctgctgcttgccatcttcaagaaggccttaccagctcttccaatctccata
acctttgggcttgttttctactttgccacagacaacttggtgcagccctttatggaccag
ctagcattccaccaattttacatttag
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