Alligator mississippiensis (American alligator): 102558977
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Entry
102558977 CDS
T03087
Symbol
FIP1L1
Name
(RefSeq) factor interacting with PAPOLA and CPSF1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102558977 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102558977 (FIP1L1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102558977 (FIP1L1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102558977
NCBI-ProteinID:
XP_019333314
LinkDB
All DBs
Position
Un
AA seq
613 aa
AA seq
DB search
PAELSGSGGGSGGSGGGDEEEEWLYGDENEVERPEEEKASAPTPSGKEEETAENGVVKKK
VTVAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYSYGTAPVNLNIKTGGRVYGSSGGKVKG
VDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMG
LEILPLTSASNKIMVQQGRTGNMEKDVILQPIKADFTSPPPLFKSGIPNRNSASSQAQTS
TASRKASAGIRKWQERYGRAGSPDIRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLS
ERSNAEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPDGRLVFWKDRMK
KKGFFPDLWPHRAGTETNVQLTHLPFPAQAKALAINSNISIPITVPPPGFPPPPGGPPPS
LIPTIESGHSSGYDGRSARAFPYGNVTFPHLAGSAPSWPSLVETSKQWDYYARREKERER
ERDRERDRDRDRDRDRERDRTRERERDRDHSPTPSVFNSDEERYRYRDYAERGYERHRTS
REKEERHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKETGSEP
APEQENTEAAPAE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ccggccgagctgagcggcagtggcggtggcagtggcggcagcggcggcggggacgaggag
gaggagtggctgtatggcgatgaaaatgaagtggagcgaccagaagaagaaaaggccagt
gctccaactccttctggaaaagaagaggagactgctgaaaacggtgtagtgaaaaagaag
gtaacagtggctgaggatgacagtgatagtgacagcgatgatgatgaggatgatgttcag
gttaccataggagatattaaaacaggagctccccaatatagctatggaacagcacctgtg
aatctcaacattaagacaggagggcgagtttatggatcttctggtggaaaagttaaaggg
gtagatcttgatgcaccaggaagcattaatggtgttccacttctggaagtagatttagat
tcttttgaagataaaccttggagaaagccaggtgctgatctctctgattatttcaactat
gggtttaatgaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggt
cttgaaattttaccacttacctcagcttcaaataaaatcatggtccagcagggcagaact
ggaaacatggaaaaggatgtgatactgcagccaatcaaagctgatttcacatctcctcca
ccccttttcaaatcaggaattccaaacagaaacagcgcctcttctcaggcacagacaagc
actgcctccagaaaagccagtgcaggcatcaggaaatggcaggaacgatatgggagggcc
ggatcacctgacataaggaggttgtctggtaccatagatgtgattggacagactatcact
atcagcagagtagaaggaagacgacgtgcaaatgaaaacagcaacatacaggttctttca
gaacgatctaatgctgaagtagacaattttaccaagccacctccatttttccctccagga
gctccacctactcaccttccaccccccccattcctcccaccccctccaactgtcagtact
gctccacctctgattcctccaccagacggacgccttgttttttggaaagacagaatgaag
aaaaaaggattttttccagatttatggcctcacagagcggggacagaaactaatgttcag
ctcactcaccttccctttcctgctcaggcaaaagctttggcaatcaattcaaatatcagt
ataccaataactgtgccaccaccaggctttccaccccctcctggaggtccaccaccttcc
cttataccaacaatagaaagtggacattcctctggttatgacggtcgctctgctcgtgca
tttccatatggtaatgtcacctttccgcaccttgcaggttctgctccttcatggcctagt
cttgtggaaaccagcaagcagtgggattattatgcacgaagggagaaagaaagggagcga
gagagagaccgagaaagggaccgggatcgggatcgtgatcgtgatagggaacgagatcgg
accagagagagagagagggaccgagatcatagtccaactccaagtgtgttcaacagtgat
gaagaacgatacagatatagagactatgcagaaagaggttatgagcgtcatagaacaagc
agagagaaagaagaacgacacagagaaaggagacatagagaaaaagaagagactagacac
aagtcatctcgaagtaacagcaggcgtcgtcatgacagtgaagaaggggacagccataga
agacataaacacaaaaaatccaaaagaagcaaagaaggcaaagaaaccggtagtgaacct
gcccctgaacaagaaaacactgaagctgcccccgcagaatag
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